| Id Trinity | TRINITY_DN38403_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_324780 |
| Sequence | CATTGCATATGTGCATTTCAATAAAGTCAAAATTTATTCAATTCATGTGTTTCGTAAATTTCTGAATGTTTCATCATTATCTGATTAAGGTACCAAAGCT ACCAACGACTCTTTCAAGTTCTACAGCTCCTCCGGCAACAACCCTCAAAGCAACTTCCAAACCTACGGCGCCGGCTCTATCTCCGGCAAAGATTCCTTCA CTAGTTACCGGAACACCGCAAATGTCGGTGCAGATTCATTCCAAAGCTACGCCGCAAAATCTAACTCCGGCACCGCCACGTTCTCCAACTACGGCAAATC CTTCAATCTAGGAAACGATAGTTTCAAGGAATACGGAAAAGGGTCAAAAGGTCATTCCACATTCGAGTTCAAGTCCTACGATTTAGGCCGCGATTTTAAA GAGTACAACAAACAAGGCGCGTCGTTTTCTGAGTACCACAATTTCACCCCAGCTAGTGGCAAAATCGGGAATAAGTCAATTGAGGAGGGTAAATTTTTCA GGGAGTTAATGTTAAAAGAAGGAAACATCATCGTAATGCCAGACATTAAGGATAAAATGCCTCAAAGGTCATTTTTACCCCTAACTATCTCGTCGAAATT ACCATTCTCATCGTCCCGGTTAACAGACATAAACGAAATGTTTCAAGTGCATGAAGGATCCGCTACAGAGCGCGTGATATTAAACGCGCTGAGAGAATGC GAGAGAAAACCGAGCATAGGTGAAACAAAACGGTGCGTTGGGTCAGCAGAGGGTATGATTGACTTTGCACTATCAGTGCTGGGTCCCAGTGTAATGGTTA GAACCACTGAGAATGTAAATGGGTCAAGGAAGAGTGTAATGATTGGAAGAGTCTATGGTGTGAACAATGGAAAAGTGACAAAATCAGTTTCATGTCATCA GAGTTTGTACCCTCACTTACTATATTATTGTCACTCTGTTCCCAAAGTTAGAGTTTATGAGGTTGATATTCTTGACATGGACACTAAGGTTAAGATTAAT CATGGGGTTGCAATTTGTCACCTGGACACGTCAGCATGGGACCCACAGCATGGGGCATTCTTAGCACTAGGGTCTAGTCCTGGAAAAATTGAGGTTTGCC ATTGGATTTTTCAGAATGATATGACATGGACTATTGGAAGTTGAATAGAAGGAAATCTCTTCACTTTGATGTTTTTTGAGTTGGCACTATCTTATATGAG AAGAGTTTAGTTATTTTTATTAGGTGTTTTTTAAGGGGACTTATTAGGTGTTGTTTCTTTGTGTGTTTGTGGTGTTATAGATATGGTTTGGTAAAAATAA TATGCATGTATAACAAGCTTGTGTAATGTCTATTAGACATAGTATAATTGTTATTAGAAAATAGCATGAATGAATATCTATGAAGATAATGTCTTTTAAT AGTGTGTAGCACATGGCATTATTTAAGAGTTTTTTATTTCTCTTAATAATAAAGCATTTAGCTACGGTATATTGGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_129978; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_324780
| Blastp | Polygalacturonase 1 beta-like protein 3 from Arabidopsis with 69.23% of identity |
|---|---|
| Blastx | Polygalacturonase 1 beta-like protein 1 from Arabidopsis with 60.98% of identity |
| Eggnog | Noncatalytic subunit(ENOG410YDAC) |
| Kegg | Link to kegg annotations (AT1G70370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430353.1) |
| Pfam | BURP domain (PF03181.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |