Ll_transcript_324826

• Id Trinity: TRINITY_DN38462_c0_g1_i1
• Name Transcript: Ll_transcript_324826
• Sequence: CTTTCTTCCTTCCTTCACATTTCGGTGCTGCCACGGCTCTTCTATGTATTTGCTGCTAACTCAGTTTTTAGCCAACACGTGTCACTCAATGCTCACTTCC TCACACTCCACTACCCCTAAATTTCCACAATTTATTTGTTGTCTAATACAATTAAAATTCACGCAACCAGATAAAAAATCAAAACAAATTAAAATTCACT TTTTATAGCTTACACTCTCTCTCAAGTGAGTGTCAATACTTTTAAATCGTTTTTTTGATGTAGAGATGGAGAGTGATGAGGGGTCAAGTGAGAAGGGGAA CAACGTGTGTGGGAATGGGATGGATGAGTTACTTGAAGTTCTAGGTTATAGGGTGCGTTCATCAGATATGGCTGACGTGGCACTTAAATTAGAGGAACTA GAAGATGTGATTGTTACTACTCAACAAAACGGGATTTCTCATCTCGCTACTCACCACACCGTTCATTACAACCCAACTGATCTACACGGCTGGGTTCACA ACATGCTTAACCAAATCGATAACAGTAACAACAAAAACGACGTCGTTTCGTCGCTGGGAGTTTACAATGACGATTCTGACCTTAGAATAATAACGGGTGT AGCTTCCTTCCCACCACCGAACGGAGAAGGTGGAAATGCGGAACCGCCATTGTCATTGCCATTGACGGATTCTCTGATCAGAAATTCTTCAATTAGATCG GAATTATGTGTTGATGATAAACCTGAGGCAATGCGTCCGGTGGTTTTGGTTCAAGAAAGCACTGGCGTGCGTCTTGTTCAGGCGCTTATGGCTTGTGCAG AGGAAATTCAACAAGGAAACATGACCATCGCCGACACGTTGGTCAATCAGATAGGATTCCTCGCGGCGTCGCAGGGAGGAGCGATGAGGAAGGTAGCATA TTACTTCGCACAAGCACTGGCTTGGAGAATCTATGGTTTCTACCCACTCCAAACCCTAGATTGTTCCTCTTACTCCGATGTGCTTCAATGCCACTTCTAT GAGTCCTGTCCTTACCTTAAATTCGCCCACTTCACCGCGAACCAGGCGATTCTGGACGCATTCTCCGCCGCAACCACAGTCCACGTCATTGACTTTGGCA TCAATCAAGGACTTCAATGGCCGGCGTTAATGCAAGCTCTAGCTCTGCGACCTGGCGGTCCACCAGCATTCCGGCTCACCGGGATCGGAGTAACACAGCC GGATAATGCTGACTCGATTCATCAAGTTGGATTGAAATTAGCGCAATTGGCACAAAACGTTGGCGTTCCATTTGAGTTTCGTGGATTCGTTTGTAACAGC TTAGCGGATCTTAACCCGTTTGTGCTAGAAATCCGACCCGGAGAATCAGTTGCTGTGAACTCTGTTTTTGAGCTTCACCGATTACTAGCTAGACCTGGAA CCGTAGAAAAAGTTTTGAACATTATCAAGGAGATTAACCCGGAGATATTGACAGTGGTGGAACAAGAAGCGAACCACAACGGTCCGGTTTTCCTGGACCG GTTCACGGAGGCACTGCATTACTATTCGAGCCTTTTTGACTCGCTGGAGGGATCGTTTCCTGGTTCGAGTGAGAGCGCGTTGATGTCAGAGATGTACCTC GGGAGGCAGATATGCAACGTGGTAGCGCGTGAGGGAGAGGAGCGAGTGGAGAGACACGAGACGCTGAGTCAGTGGAGGGTTAGGATGGGTTCAGCAGGGT TCGAACCGGTTCGTTTGGGTTCGAATGCGTTCAGGCAGGCAAGGATGTTGCTGGCGTTGTTCACTAGTGGAGATGGGTATAGGGTGGTGGAGAACAATGG GAGCCTAATGCTAGGGTGGCATACGCGCCCACTTATTGCCACCTCCGCCTGGAGAGTCGCCACCGCCACCGCCATTGACTCGGTGGTCTGAGTTGGTAAA CAAAAATAGAAGACATAACTGTGAGAGTAGTTAGATGTTGGAATGGGAAGTTCAAGTTAGAGACAGTTTAATGACGGAGAGGGAGGCAGAGAATAATAGT AAATAATAAATAATTAAATAATTATCAATCATACTTTCTTTCTAGTTGTAATAATTCTATTTAAAATAACTTTTCTTGTTGTGAAACCTTTTCTAAATGT TACAATTTGGATTTCCCTGACCCCCATAGATTTTAGTTCATTTTTCTTCCTCTTAGCTTTTCAGATTAACTCTAACTTTGTTGTTCTCGTTTTAGAGTTG TTCAATGGTTGGGTTAGTTTACGTTTAAAATAATGATTGTGAGATCTATCTCAGGCTAGCCACTTCACTATTTATTGGCCTGAGGGTCACAATATAATGA TCTATCAAAACCAGTCTCAGCAAAGAAGCTGTATGGCGTTGAGGTCATGAAATGGAGCAGGGATTCTCCTCGCTTTAACAACCTCCACCTTCATCCACTG CTCTTTTCTTCCTTCAACTTTTGACTCTGCTTTCTTCAGAATAATGTTCATATGTGGAGTCCTTGGGACTATCTTCAAATTTTGAAACAGATTATGAATA TGATCCATCAGGGATCATACACTGAAAATGACAGCACAAGCAGGTATTTCGTACACTTCAAACAATAAATGGAAATGGCTAAAGTTAAATATTGTTTTGT AGTCTATAAGTCATTCCAAACTGTATCAATAGCTTGAACAAAAGAAAATAATGAAATCGAACTAAAGTACCTAGCAGCTCTTCATATATTTATTGTTTTC AATAGTTAGGCTTTCCATAATCCAGGAATCAGATAAGTTGCTCATGTTCAACCTAGAAAATAATGCAATGAGATTTTCGTACTGAAAGGTAAAGTGCAAC AACTCCTTGTTAGTTTGTTT
• Tissue: pods
• Gene name: LI_gene_130038;
• Additional information: details;

Expression of Ll_transcript_324826

FPKM

• PAB: 0.4
• PNAB: 9
• PS1: 23.3
• PS2: 7.5
• PS3: 11.8
• PW1: 2.1
• PW2: 2.5
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_324826

• Blastp: DELLA protein GAI from Gossypium with 63.41% of identity
• Blastx: DELLA protein GAI1 from Vitis with 59.03% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459128.1)
• Pfam: Transcriptional regulator DELLA protein N terminal (PF12041.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;