Ll_transcript_534175

• Id Trinity: TRINITY_DN38644_c0_g1_i1
• Name Transcript: Ll_transcript_534175
• Sequence: TTAGAATTATCGCTTCCGTGGCAAGAGTTGCAGTAAGTAGTAACCGCCGCAAACGAAAGACACCAACAATGGTTGTCTCGTCACTTGTTAGTTCTTCTTA TACTTCTACTTCGATTTTTCACGTTCTTCCAAGCAATTCAGACCCTCCATACAAACTTCTCCAAAATCACCCTTCTCTTAACCTCCTCTCTCAATGCAAC AGCATCAACACCTTCAAACAAATCCACTCTCACTTCATCAAAACCGGTCTCCACAATACCCTCTTCGCCCAGAGCAAACTCATTCAATTCTGTGCACTTT CCCCTTTCGGCGACCTCTCTTACGCTCTCTCCCTCTTCCATTCCATTCCACAGCAACAACAACAGCTCAATCACTTTATCTGGAACACCATCATTCGTGG TCACTACTTAACCCTTTCTCCCATTTCATCATTAGAAACTTACACTCGCATGCTGGAATCTGGGGTGGTACCCAATTCCTACACTTTCCCTTTCCTTTTC AAGTCTTGCGCCAAAACTAAGGCTACCCATGAAGGGAAACAGCTTCACGCGCATGTCCTCAAGCTTGGGCTTCACTCTGATGCACATGTACATACTTCCG TTATTACTATGTATGCACGAGTTGGTGAATTGGCTGATGCGCGGTTGGTGTTTGATAAAAGTACTCTCAGAGATGCGGTGTCTTTTACGGCTCTGATAAG TGGGTATGTCTCCATGGGTTATGTAGATGATGCTAGACAACTTTTTGATGAAATTCCAACAAAAGACGTTGTGTCTTGGAATGCAATGGTTGCAGGGTAT GTTCAAAGTTCTCGTTTTGAAGAAGCTCTGGCTTGCTTTAAGGAGATGCAGAAGGCAAATGTGCCGCCCAATCAGAGTACAATGGTGACTGTACTTTCTG CTTGTGGTCATTCAGGAGAACTTGAGTTGGGGAACTGGATCAGTTCTTGGGTTAGAGATCATGGGCTTGGCTCAAACATTCAGATTACGAATGCGCTCAT CGATATGTATTCCAAGTGTGGCAAAGTTGAGAAGGCTCGTCAGTTGTTTGATGGAGTAAAGGATAAAGATGTGATTTCATGGAATACTATGATCAGTGGT TATTCTTACAAGGGTTTCTATGAAGAAGCATTAGCACTCTTTGACCTCATGCTTAGATCAAACATATCGCCTAATGATGTAACCTTTTTGAGTGTTCTTC CAGCTTGTGCTTGTCTTGGCGCCCTTGAACTTGGCAAGTGGGTTCATGCCTATATTGATAAAAACTTGAAGAGCACAAGCAACGCTTCTCTTTGGACAAG TCTCATAGACATGTATGCAAAATGTGGATGCATTGAGGTGGCCGAACAAGTGTTTAGAAGTATGGATTGTAGAAGTTTGGCTGCTTGTAATGCCATGATA TCAGGGTATGCCATGCATGGACATGCAGAGAGGGCTTTCGGTCTTTTTTGGGAAATGGTTAATGAAGGATTCCAACCGGATGACATCACATTTGTTGGAG TCTTATCTGCTTGTACTCAAGCTAGTTTGATAGATCTTGGACACCAGTATTTCAATTCAATGATCCAAGATTTCAGAATTTCACCAAAACTGCAACACTA TGGTTGCATGATAGATCTCCTAGCTAGAGCTGAGAAATTTGAAGAAGCTAAAATTTTGATGAGGAACATGGAAATGGAGTCAGATGGAGCTATTTGGGGT TCTCTGCTTAGTGCTTGTAGGGTCCATGGAAATGTCGAGTTCGGTGAATATGCTGCAGAACGACTCTTTCAATTGGAACCAGAAAATCCTGGTGCATTTG TGCTTTTGTCAAACATATACGCAGGAGCTGGAAGATGGGATGATGTAGCTAGGATAAGAACCAAGTTAAATGACAAAGGAGTGAAAAAAGTGCCTGGTTG CACCTCTATAGAGGTTGATGGTGTTGTTCATGAGTTCCTAGTTGGTGATAAGTTCCATCAACAGAATGAAAACATTTATAGAATGTTGAATGAGGTAGAC AAGGTTTTGGAGGAGGCTGGGTTTGTGCCTGACACTTCTGAGGTACTCTATGACATGGATGAGGAGTGGAAGGAAGGAGCTTTGGCTCAACACAGTGAGA AGCTGGCTATTGCTTTTGGTTTGATAAGCACAAAGCCTGGTACCACAATTAGGATCGTGAAGAATCTTCGTGTTTGTGGAAACTGCCATGCTGCTACTAA GCTCATATCCAAGATTTTCAATAGGGAAATAATTGCCAGAGATAGGAACCGTTTTCACCATTTTAAAGATGGGTTTTGTTCGTGTAATGACTGCTGGTGA ATATTAATTTGTCTATTCAATCGAATAAGATGTGCAGAAGG
• Tissue: pods
• Gene name: LI_gene_130219;
• Additional information: details;

Expression of Ll_transcript_534175

FPKM

• PAB: 0.3
• PNAB: 0.9
• PS1: 0.7
• PS2: 0.7
• PS3: 1
• PW1: 1.1
• PW2: 1.9
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_534175

• Blastp: Pentatricopeptide repeat-containing protein At1g08070, chloroplastic from Arabidopsis with 61.67% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g08070, chloroplastic from Arabidopsis with 62.14% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G08070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439867.1)
• Pfam: PPR repeat (PF12854.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;