| Id Trinity | TRINITY_DN38769_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_427172 |
| Sequence | GAAGTATCTTTGCATTTGAAATGCAATAATGCTGCCTTCTTGCTTTCCCCTCACTCTTCTTATTGCATTCATGCTACTCATGCACCAGGTTATTCACGTA GGCGAAATCGGAAGGTCTTTACAACCCCCAAGGCTCCTCCTAAGCCTTCCATCTCAAAACCACTTCCTAACAAAAGCAGCACTAAATTCAAGGGACCACA ATTTGATGAAACCATTAGAGACACAAATGTTCACAATCATCATCAACTCACTGGGGAAACAAATGCTTATATTGCTCTTAGAATAAGCGAGCAACTTCAT CGACTATCCGTGCTGGAGTGGGAAGCAAATTTACGGAAGCGAGAAATAGAGATGATTGCAGAGGCTAACATTTCAAATGGGAAGAAGCTGTTTATATATC CTCCCATGGTTAAACCCAACCAGTATATAAAAGTATTCCTCAATAGGAGTCTTTCAACTCTAAGTAATGAGCCACATGTTCTGATTAAGGGGGCATTTAA TGATTGGAGCTGGAAATCTTTTACCCTTACCTTAAATAAAACAAATCTGTATGGTGATTGGTGGTCTTGCCAGCTATACATTCCAACAGAAGCCTATAAA GTGGACTTTGTCTTTTTCAATGCCCAAAATGTCTATGATAATAATGATAACAAGGACTTCTCCATACTTGTTCATGGTGGGATGGATGCATTCCGGTTTC AAAATTTATTAATTGAGGAGAAACAGAAAGAGTTAGAAAAAGTTGCTCAGGTGCAAGCTGAAAGGGAAAGCCGAGAAGAAGAGCAGAGGCGAATGGAAGA GGACAAGTCACTGGCGAGGGCGGAGACTGAAAGAAGGAGAGAAGTGTTTCAGCAAATGATAAAAAATGCTGTGAAGTCCATTGACAACGTTTGGTATATA AAAACTAGTGAATTTAAAGGCAAGAAATTGGTCAAATTATATTATAATAAAAGCTCAGGCCCTCTTAAACATGCTAAAGAAATATGGATTCATGGGGGAC ACAATAGTTGGAAGTACGGATTATCAATTGTTCAAAGGCTTGCGAAATGTGCTTCAAGGGATGGTCATTGGTGGCATGTTGATGTTGTTGTACCTGGCCA GGCGTTTGTCCTGGATTGGGTCTTTGCTGATGGTCCACCTCACAATGCAATTGTGTATGATAACAACCATCAATATGACTTCCATGCTGTTTTGATAAAG GTCATTCCTGATGAAGAGTATTGGGTTTGGGAAGAGCATGTGATATACACCAAATTTCGGAAGGAGAGGAGGCTAAGAGAGGAAGCTATACGTGCCAAGG CTGAAAAAACTGCACGTATGAGAGCTGAAACAAAGGAAAAATCATTGAAAAGATTTTTGCTTTCTCAAAAGCATACTGTTTTCACTGAGCCTCTCCAAGT TCAAGCAGGGAGAACAGTGACTGTGTTTTATAACCCATCTAACACAAATCTAAATGGAAAACCAGAGGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_130349; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_427172
| Blastp | Starch synthase 3, chloroplastic/amyloplastic from Arabidopsis with 57.65% of identity |
|---|---|
| Blastx | Starch synthase 3, chloroplastic/amyloplastic from Arabidopsis with 56.89% of identity |
| Eggnog | starch synthase activity(COG0297) |
| Kegg | Link to kegg annotations (AT1G11720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460132.1) |
| Pfam | Starch/carbohydrate-binding module (family 53) (PF16760.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |