| Id Trinity | TRINITY_DN38847_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_322947 |
| Sequence | CTTCAGTGAAGACATTAGTCTCCTGAAATCAGAAACCATTTTAATCTCCTTTCAATTGCTGCAAGTATTCCCATCTCTCACTTGATCTATGTTCCTTCTG TCCTTGAGAATTTCACTCAGAGGTTTGGGGTCCTTGAAATCAGCCAATGTGCTCCTACAATGCAAACTTTCTTCTGTCTTCCTTTTCTTCTTCTCTTCTT TAATTTCTGCAAGAGTCTTAGGTCCTGAAAATGTAGTGGACTCATGGATAGAATTCCTTTGTTTTAAAACTGGTTTCATGGATGAAACAAAATGCTCTTT AGCTAGTTTTTCTCGATACTGTTCCCTTGGCCAATGTTGCTGCTTGGAATGCCTAAATAACCTGCGCCTTTTCGCAGCCGAAAGAGTTTCAACCTCTCCA ATTGATTCTACAGTGCTGAAGCCCAACTGTGATGTCAATCTTCTTCTACTTTGCTGCTGATCAATGCCATACCCTCGCTGCCTTTTCTGGCTTCGAACCA CGAAAGACGATTCATATCTTCTTAAGAAACCTGTAGCAGGAGGAACATTAATTTCCTTACGTCTCCTCAGATGATCCCTAAGATCCATGTCCCTGCCACA ATTAGCTCTGTCGGTAAGCATATGAATCCGTTTCCTGGACAAAATAGAATCCAAGAATATCTCTCGGGAATAAGCGCAAACTTTTCTGTCATCAACATGT ATAAGATCTCTATCTAAGCATCTGTAACCATCATACGTTTCTTGCCCATACATAATGTCAGCTCCTGGAAGTATAGTATCACATTCATCTGGGCTTTTAA ATTCACACCCCAAGTATTGCTCATCCAGTTCCTGGTGTTCCCTATCAAGGACTGGTAAATATTCAGAATCATCTTCATAGCCCAAGTTCTCCAATCCATC ATGAACAAGAACATCAAATCCAGGAGAAGATTCCCACCTCTCTTCAGGCTCTCTGTGACAATTTACTTGCTCATCTGAACACTGGTCAGAGCAAAAATGA GATACCCTATGAACAAAGCCTTCACCTCGAGATAGAGAGTCTGACCTAGTTACTGTAGCTTCTTTATGCTCAAAAGAAGATATCCCTAGGCAATCATCTT GCGGTTTAACATTTTTGGGTAATGATAGCTGCAGATTTTCCTCATGCGGAACTTTAAAGCGAGACAAGGCAGTCAAAGCTGGGTCAGAATATGTTTCAGT TGGAGTTGATGCTACACCTGTTTTATTTGCCGATGATGTTTTATTATCTAGGATGAGTGCATCAGTGCTTCCATTGTCATTCTTCATACATTTTAGATTA TAGAAGCTATCATCTGGCGTGTGCAAAAATGAGCATCTCTCGCCTTTGATGCAAAATCCATTGAAGAAGTAATAACAGGGAACTGCTGCTTTGCTTGTGG GTAGGGGAGATTGCGTAGGTTCAGATGGAATTCCAGTATGCCCATCCAATGGCTGAAACAGTGTCAAAAATTAGTTAAAAATGACAAGAGATAACAGCTG AGAGGACAGGCAAATTACTATTAAACAATATCAAGTTCAGAAAACCTGAAATTTAAGAAAGATGGGATAATAGCAACAACTTAATTTCACTGTACATTAA CGATGTAATGACTTTGATAGACATGTTCATAAATATAACATGTATAATCCTCAAATTTATTCAGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_130430; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_322947
| Blastp | Zinc finger CCCH domain-containing protein 34 from Oryza sativa with 27.12% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 19 from Oryza sativa with 45.31% of identity |
| Eggnog | chromosome 12 open reading frame 50(ENOG41101ZI) |
| Kegg | Link to kegg annotations (4337959) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464777.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |