Ll_transcript_322936

• Id Trinity: TRINITY_DN38880_c0_g1_i1
• Name Transcript: Ll_transcript_322936
• Sequence: GTATCATCTTCATCAGAAGCATAAACCCTAGCCATGGCGATTGTGATGATGAAGCTTCTTCGCAGAATTGTAATTCAAACGACAAGGTCATATTACACTA GTAGGAGCAATAAACCTACACTCTACTCCAAAATCAGTCCCCTTGGAAACCCTACCACGAGTGTCATACCTGAGCTCGACGATTGGATCTTCAAAGGGAA CAAGCTTAGAGTCGCAGAGCTTCAACGCATCGTTCGCGATTTCAGAAAGCGTAGGAGGTTCACCCAAGCTCTTCAGGTGTCTGAGTGGATGAGCAAGAAT GGTGTGTGCATATTTTCTCCAGTTGAACATGCTGTGCATTTGGATCTTATTGGCAAGGTTCAAGGATATCCTTCTGCAGAGAGCTATTTTAGTAGCTTGA CGGACCAAGATAAAACTGACAAGACATATGGTGCTCTTTTGAATTGCTATGTTCGTCAGCGCCAAGTTGACAAAGCCCTCTCTCATTTGCAGAAAATGAA GGAGTTGGGGTTTGCTTCGTCACCTCTAACTTACAATGATATTATGTGTCTATACACAAATATTGGCAAGCACGAGAAGGTTCCTGATGTGCTGACTGAG ATGAAAGAAAACAAAGTTTTGCCGGATAACTTCAGCTATAGAATATGTATAAACTCTTATGGTTTGCGGTTTGATATCGATGGAATGGAAAGATTATTGA AAGAGATGGAGAGTCAATCACACATTGTGATGGATTGGAACACTTATTCTGTTGTGGCTAATTTCTATATAAAAGCAAGACTTACAAGTAAGGCAGTCAA TGCCCTAAGGAAATCAGAGGAAAGGCTAGATAACAAAAGTGGGTTGGGTTACAATCATCTTATCTCTCTCTATGCCCGGATAAGAAAAAAGGATGAGGTC TTAAGATTATGGGATCTGGAGAAAAGTGCTTGCAAGAGGTGCTTAAACAGGGATTATACGACTTTGATGGAATCTCTGGTAAAGCTTGGCGAGTTTGATG AAGCTGAGAAAATACTGGAGGAATGGGAATCCTCTGGCAATTGCTATGATTTTGGAATCCCGAATATCGTAATCATCGGGTACTCAGGAAAAGGTTTTCC GGAGAAAGCAGAAGCCATGCTTGAAGATTTACAGAAGAAAGGAAAGGTCACCACCCCAAACAGTTGGTCTGTAGTTGCAAGTGGATACTTGAATAAGGGT GAGATGAAGAAAGCATTGAGGTGCTTGAAAACAGGCCTCTCTTTGTATGTCGAAAATAAAGGATGGAAACCTAACCCCAAGTTGATCTCAGGCATATTGA ATTGGCTAGGTGATAAGGGCAGTGTTGAAGATGCAGAGGTTTTGGTGAGTTCATTAAGAAATGTTGTCCCAGTAGATAGAGAAATGTATCATGCCCTAAT CAAGACTTATGTAAGAGGTGGTGAAGAGGTGGATGGACTATTGGACCGCATGAAACTAGATAAAGTTGATGAAAATGAAGAAACTAAGGAGATTGTTAAT ATGAGGAAGGCATAAAATTGGAAACCTTTCACTTAACTCTGCTGTGGCTGAGCCATATATGTTCATGTGTGGATATGAACAGGAATGTGTAGAATGTAGA CAAGACTCAAGAGAACGAGAGAAGAGTAATTGGATTTGGGTGGAAGCTTTGAAGATTCATTAGATGACGCCCAGAAATGAAGCACTCCCCATTGCCTGCA TACTTATAATGCAATTTTATTTTCAACTCAATGGTGGAAAACTGGAAAGGAATTGACATACTTAAAAATACTGTTGGAGTTTGATTAGTTAAATATGCAG CCAAAGCTTATTTACTCGATTAAACAAATAAGCTTAGGATTGAAACGGGACTCAATTATTTAAATGGGTCAAGCAGAGTCTCTCTTTTAGAAGCACTATC AGAGTGAGTGTATTTATTTATTACACTGATTGTTCACTATGTACTGTGTTTAACATTTTCTGGCATTAGAACTTGTTTTATAAAACAATTGCTTTCTGCA ATTGAAGTTGTTTAGGAGAGACAGCCACACACTTAAAAAAGATTAGTTCCTTACCTAAAAATATAAGAGGTACTACCAAGGAACCATTCTTAGATAAAGA ATTAGT
• Tissue: pods
• Gene name: LI_gene_130466;
• Additional information: details;

Expression of Ll_transcript_322936

FPKM

• PAB: 0
• PNAB: 2.5
• PS1: 2.3
• PS2: 2.1
• PS3: 2.1
• PW1: 2.2
• PW2: 1.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_322936

• Blastp: Pentatricopeptide repeat-containing protein At4g21705, mitochondrial from Arabidopsis with 57.26% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g21705, mitochondrial from Arabidopsis with 57.26% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G21705)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440252.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;