Ll_transcript_283968

• Id Trinity: TRINITY_DN39087_c0_g1_i1
• Name Transcript: Ll_transcript_283968
• Sequence: CTCATACCTACCTTCTTCCTTGCACCTTGATCCTATTCATTTCAACACAAAACGACCGCGTTTTATTCTCTCCATAAAAAAACCCTAATCGAAATCTCCA ACACTGAAGAGAATGAAGCGAGTGTGGAGATTCTCCTCAGAACTTCAATTCAATGGAATCTCTCTTTCTTCAAACCCAAAACCAATTCCAATTCCCCCAT TCACCGCATTGCTCAAACCATCAACAACTTCTTATGGCTTCGCGCGTGAACTCAATACCTTACCACCCAACAAGGTCACAGATATAATTCCCCTTTTCAC AGAAAAGCCTCGTCCCAATCCAACGGAGGATCTCATGAAGAGGGTTGCGATTTTGAGGAACGAGTTGGTTCGAGAAGCTTCGGATTCTGATAGGGTTTGG AAGATTTTGGATGAGAATTTTGTTGATTTGATTCAATCTCATCATTCTGATGGATCTGCGATGCTTGAGCTCTTGAAACAGTTGGATTCATGGCCTGCGT TGGCTCTCCAGGTATTTAATTGGAGAAGAAGGAGCTCTGGCACGGACAACCCGATGAGTGACTATGAGTACTCTAAGGGTATAAAAGCTGCAGGTAGATC GAAGAATGTTGATCTCGCGGTTCAACTCTTTAGAGAGGCTACAAACAAGGGTATCAAAACAACCAGCACATACAATGCACTGATGGGTGCTTTCATGTTT AACGGCCTTGCCGAGAGATGCCAGTCCCTGTTTTGTGATATGAAGAAGGATGCAAATTGCACTCCTTCCATTGCCACATACAATATTCTTATATCTGTTT TTGGTCGCTTGATGTTGGTTGATCACATGGAAGCAACATTGAAGGAGATTAATGAGTTACGCCTTCCGCTTAATATTAACACTTATAATCATTTAATTGC CGGGTACATCTCGGCTTGGATGTGGGATGATATGGAAAAAGTTTTTCAAATGTTGAAGTCCAGCCTTGTCACACCTGACATGCAAACCTACTTGCTAATG CTGCGTGGATATGCACTTTCCGGTAATCTAAAGAAGATGGAAGCGACATATTCTTTGGTTAGGGATTATGTAAATGAAAATGATATTCCGTTGATCAGGT CCATGATATGTGCGTATTGTAAAAGTTCTGAAGCAGATAGAATTAAGAAGATAGAGGCATTGTTGAAGCTTATTCCAGAAGAAGAGTACAGGCCATGGTT AAATGTGTTGTTGATCAGGCTCTATTCCGAGGAGGATTGGTTAGAGAAAATGGAAAATGCAATAAATGAGGCATTTGAGCACCAAACCCCTGTAACAACA ACGAAGATTATGAGATGCATAATTGATACTTATTATCGGTGTAATTCAATAGAAAAGCTAGAAATTTTTCTCAGACGTGCTGAATGTGCTGGGTGGAGAA TCTGCCGATCATTATATCATTGTAAGTTGGTCATGTATGCATCACAAAAGCGCTTTGAGGAAATGGAAAATGTCCTCGTTGAGATGGAAGGTGTGAACCT TGCTTGCACAAAGAAAACATTATGGATAATGTACAAGGCTTACTTGAGCAGTGGTCAGAGATCAGTGGTTTTGAAAATATTGGGACAAATGTTCAAGCAT GGTTATGACGTTCCCTTGGAAGCATTTCCATCATAAAATATATTGTCTAAGGTGCATATCACCTGTGTTAGTTATTTTCAACACACTCAAAAGATTAATG TTCAAATGTTCATTAAATTGCCAGAAATTAACATTACCTTTTTCTTTTATCCATTTTCAATCTAGCGTCTAGTCATAACATCACATGGTGTACAGTTAGT CATTCAAGAATTCTCAGAATTATTTGTCATTACAGGCATAAGGCTTGCTATATGATTAAAATTCTGTCCTACGAAATTAGGGTGTTTGGACTTTGGTAAT TTTTTGTTTGTACAACTGATCAATTAGTCAAGTTCATGATAAAGAAATTCTGATATCTGTATTTTTTTCTGTTTGACATCATTGTTTATTTTCTTCATTT GGATATCAGAGAATCTTGGTAGCAAATTTTCTTAGGGCACTGTAAAATGTTGCTCAAGGTTGATGACACTGTTAATTCAGGACCATCCCTATTAAAGATG TATTGGTACCATTGGTAAGCTTATCTTTTGTCTACACTTTTAGTTTCTTAATATGAATC
• Tissue: pods
• Gene name: LI_gene_130679;
• Additional information: details;

Expression of Ll_transcript_283968

FPKM

• PAB: 3.9
• PNAB: 5.2
• PS1: 6.5
• PS2: 5.4
• PS3: 5.5
• PW1: 5.3
• PW2: 3.8
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_283968

• Blastp: Pentatricopeptide repeat-containing protein At2g30780 from Arabidopsis with 51.4% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g30780 from Arabidopsis with 51.4% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G30780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455420.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;