Ll_transcript_329308

• Id Trinity: TRINITY_DN39107_c0_g1_i1
• Name Transcript: Ll_transcript_329308
• Sequence: TTCAGTTCCAATGCTCTCCAGGGAAGGATCATAACTTATAAGTGCTATGTCTATGTATATCCATGTCTTCCACATCTTTAGAGGCCAAGATTTTGAGCAA TGGAAGCTCGTGTACCGAAGGTAGTGGACAAAGTTGAATCCTTATCGGTGTCGGAATCTAAATCTTACTATCACTTTGTACTCTATGGCTTTTCGGTTAC TGTCCTCTAAGTATAGGGTCTTAGCTTCGTTCTTTCATCCTCTTATTCAACATAAGCCTCACCACTGTCACGGCTTTCAGTCTTTCTCAACATCACAACA AGTCTCTGCATCATTATTACCAGACCTTGTGAACGAGATTTCACGTGTACTCAGTGATCACCGACAACCTCACCATGATCTTGAACACTCTCTCAGTCCA TTTTCAACACAAATATCCACCGATTTGGTTGAACAGGTCCTCAAGAGGTGCAGTAATCTTGGCTTTTCTGCCCACAGATTCTTTCTTTGGGCTAAATCAA TTTCAGGTTTTCAACACACTGTTCAGAGCTTCCACATTTTGGTTGAAATCTTAGGAAGTTGTAAACAATTTGCCATACTCTGGGATTTTCTCATTGAAAT GAGAGAGTCTCATTGTTTTGAAGTCACAAGTGAAATTTTCTGGCTCATTTTCAAGGCATATAGTAAGGCTAGTTTACCAGAAGGTGCGATTCGTTCTTTC AGTAGAATGGATGAATTTGGAATTAAGCCAACTACTCATGATTTTGATAAGCTTTTGTACTTTTTATGTAAATGGAAGCATGTTGAGCAGGCTCAACAAT TTTTTGATCAAGCTAAGAGTCGCTTCGCGTTAACTGCTAAAACTTTCAGCATTTTGATAAGTGGGTGGGGTGAGATCGGTGACTCAGGGAAGGCCAGTGA GCTGTTTCATGCCATGATCGAGCAAGGATGTCCAGTTGATTTACTTGCATATAATAGTTTGCTGCAGGCCCTTTGCAACGGAGGCCAAGTGGATGAAGCT TCAAAAACATTTTATGACATGGTGTCAAAAGGAGTTACGCCAGATGCTTTTACTTACTCGATATTCATTCGTACATATTGTGATGCAAATGATATGCATT CAGCTTTCAGGGTTCTCAATAGAATGAATAGGTATGACCTTTTGCCAAATGTGTTTACATACAATTGTATCATAAAGCGGCTTTGTAAGAATGAAATGGT GGGTGATGCTTATCAATTGTTGGATGAAATGATTTCAAGAGGTGTTAAACCAGATACTTGGAGTTACAATGCAATACAAGCTTACCATTGTGAGCATTCT GAGGTCAATAGGGCTCTAAGGTTAATATCTAGAATGGAAAAAGATAACTGTCCTCCTGATCGCCATACCTATAATATGGTGCTCAAATTGCTGATTAGGA TAGGAAGGTTTGATAGGGCAACTGAAGTTTGGGAGAAAATGTGGAGCAACAAATTTTACCCTTCTGTCTCAACATATTCTGTCATGATTCATGGTTTATG TAAGAAGAAGGGGAAGCTAGACGAGGCATGTAATTACTTTGCGACGATGATTGATGAAGGAATACCGCCTTACTTAACTACAGTCAAGTTGCTGAGGGAT CGGCTCTTGGGCTTAGGGCTTTTGGATCACATTGAAATACTGACTGATAAAATGAGGCAGAGTAGTTCCTGTCATATCCAAGAAATGGCAGGTATTATGA TTGGTCATAGAGCAGCTCATAAGTCTTTGAGCCACGATGAGACGGACATAGAAAGTGACTGAAGAAGTGGCTCTTTTTTCTCAAAACTGTTCTGATGAAA TGCTTTATGCTATTTTCACAAATATATGGACCAGGTTGAGCCACCCGGTTCAGCTCAACCAATTGTGAAGGCATTCCTGATGAAATCTTAGAGTGGAAGA ATAAGGTCCGGGAAACTCTGCAAGTCGATCTGCATGCTAAGCATAAACTGGTGGCATCCTACAACAATATTAAACTTGAACTTTACCTTTAGTTTTCTGC CTCTCCTTATTCCGGCGTCAACTATATTTTTGTATCGGACCACTGGCACTTCATGTAGTAACTTAATGTGTTCATTTGATGGTTAAGGTTTGCACCCTGC CATTGAGTATTCAAGGTAGAAGCATAAACGGAACCACTGGCACTTCATGTAGTAACTTAATCTGTTCATTTTGAATGTTATTGTTATGATGCTGAAGGAA TTTTCTTTTTATTTTGATTCTCTTTATTCTAAAATTGACTTGCAACTCACAAGTAGTAAAATCATTACTAGGAG
• Tissue: pods
• Gene name: LI_gene_130697;
• Additional information: details;

Expression of Ll_transcript_329308

FPKM

• PAB: 1.3
• PNAB: 4.5
• PS1: 4.4
• PS2: 7.3
• PS3: 5.5
• PW1: 2.5
• PW2: 3.1
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_329308

• Blastp: Pentatricopeptide repeat-containing protein At1g52640, mitochondrial from Arabidopsis with 59.92% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g52640, mitochondrial from Arabidopsis with 59.92% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G52640)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420990.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;