Ll_transcript_428097

• Id Trinity: TRINITY_DN39209_c0_g1_i1
• Name Transcript: Ll_transcript_428097
• Sequence: TTGATATTTGGCAATATAGATAAGTTTGGAGGTGACATTTATTACTCAGTTGTTACTTTTATGAGTGAAATAATCCTCAAAGATCCTACTTGTTTTTCTG CTCTCCATAAGATGGGTCTTCCTGATGCATTTTTATCTTCAATTGAATCTGGAATACTCACGTCATCAAAAGCTTTGACATGCATTCCAAATGGTCTTGA GGCCATTTGTCTTAATGCCAAAGGGTTAGGAGCTGTTAGAGCATCTTCATCACTGCAGTTCCTTCTTGGCATTTTCACTAGCAAAAAGTATGTTTTAGCC ATGAATGAGGCTATTGTTGAAATTTCACATTATGTGGCGAAACTGCTTCATCATGTTACTTCATTGAGAAGTGCTGGTGTTGATATTATCATTGAAATCA TTGAGAGGATTGCATCCTTTGGGGGTAGTTCCGGCACAGGTTCTCCAGGAAAAGCTAATGAGGATACTGCAATGGAAACAGATGCTGAAGTCAAAGCAAA AGAAGGCCATTGCGGGCCGGTAGGTACACCGGTAGATTCATCTTCTGAAGCAATAAAGGATGAACAGTTTATT
• Tissue: pods
• Gene name: LI_gene_130793;
• Additional information: details;

Expression of Ll_transcript_428097

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.1
• PS3: 0.4
• PW1: 0.6
• PW2: 0.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428097

• Blastp: E3 ubiquitin-protein ligase UPL2 from Arabidopsis with 37.04% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 41.86% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G70320)
• CantataDB: Link to cantataDB annotations (CNT0001834)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434286.1)
• Pfam: Domain of Unknown Function (DUF913) (PF06025.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;