Ll_transcript_524816

• Id Trinity: TRINITY_DN39414_c0_g1_i1
• Name Transcript: Ll_transcript_524816
• Sequence: CATGATTTCAGATGAGTCTCTGTTTCACAATGCTCTGATCACTCTCTACCTCATTGCTCCACCAACCTTCATCTCTCTCATTTTCCTTCAAGCCCCTTAT GGCAAACACCATCGACCAGGTTGGGGTCCAAATCTTCCTCCACCATTGGCTTGGTTTCTCATGGAAAGTCCCACACTTTGGCTTACCCTTTTGCTTTTCC CCCATGGTCAACACTCCTCCAACCCCAAATCCATTATCCTCATCACCCCTTTTCTCATTCACTACTTCAACAGAACATGCTTATACCCTTTGAGACTCTT AACCTCCCCTTCTAAGAGAACCTCAAATGGGTTCCCTTTTAGTGTTGCTTTGATGGCTTTTGTGTATAACTTGTTGAATGCTTATCTTCAGAGTAGATTT GTGTCTCATTACAAAGTCTATGATGTGGGTTGTTGGTTTTGGTTCAAGTTTTTTGGTGGGGTGGGTGTGTTTTTGTGTGGGTTGTGGATTAATGTTTGGT CGGATAAGGTTTTGTTGAGACTCAAGGGTGAAGGTAAAGGGTATGTGGTCCCAAAGGGAGGGTTGTTTGAGGTTGTGACTTGTCCTAATTACTTTGGGGA GATTGTGGAGTGGCTTGGTTGGGCTTTGATGACTTGGTCTTGGGTTGGACTTGGGTTCTTTTTCTACACTTGTGCTAACTTGGTGCCTAGAGCACTTGCA AATCATAAGTGGTATTTGGAGAAATTTGGGGAAGATTATCCTAAGAATAGGAAAGCTGTTATTCCATATTTGTGTTGATTTTATTTTATTTCATTTTTGT AATTGGGATTTTTATGTTATTGCCTCTTACCAACAAATCAATATGAATTTGTTTCTTGCAGCAAAACTTTATATATCTAATATGTAGTTGCATAATTGGT CTGGTTTAAGTTTTTTTTAATTGCTCATTTATATATTATTCTTTGTTAATCAAAGTTGTGTGACACTATGT
• Tissue: pods
• Gene name: LI_gene_131015;
• Additional information: details;

Expression of Ll_transcript_524816

FPKM

• PAB: 1
• PNAB: 14.8
• PS1: 8.9
• PS2: 5.1
• PS3: 7.6
• PW1: 9.2
• PW2: 10.7
• PW3: 4.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_524816

• Blastp: Steroid 5-alpha-reductase DET2 from Gossypium with 66.41% of identity
• Blastx: Steroid 5-alpha-reductase DET2 from Gossypium with 66.41% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461348.1)
• Pfam: 3-oxo-5-alpha-steroid 4-dehydrogenase (PF02544.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;