Id Trinity | TRINITY_DN39444_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_524757 |
Sequence | GTTTTCCATCACTTATGAAAAAGTCTATAATGTCTAATAAAATTACTCTTGCAATTTTTTTCCTTCTCAATGTCATTTTCGCATCTTCGGATTCCAAATC AGATTCGAAAGCATACATTTTGGCCTTACAATGGCCTAATACTACTTGTTTCATGAATGGCAAGACGATTAGCAAAACAGTAAAGAATCCCAAGAGCTTT GGGATTCATGGGCTATGGCCATCCAACTCCGAACAAACCTCTAAAGAACCTTTTCCTAAGGATGGGTTCAAATCATTGTGTCCACAGACTCTACAAATGG AGATTCCAATTTATTGGCCCAATATGATTGAAGATAATAATGCGAAATTGTGGTCTATAGAGTGGAACAAACATGGCAGATGTTCTGGATTTGACATATG TACCTATTTTTGGAACACCTTAGGTTTATTCAAAACTTTGAGAGCTATAAATCTTGTGGGTGAGCTGGAAAAAGCTAGTAAACCAGTTGTTGTTGGTAAT TCATATGATTTATCCACCTTATCTGCTGCTTTCAAGGAGACCCTTGGGGGTGGCAAGAATGATATATTGATCCGATGCGCTAAAATTGGTGAAAAATATT ATCTTTGGGAAGTGCATGTGTATTTAGACGCTAAGCTGACTCGTGTTCAACCTCCTGAGGTAGCTCGAGGTTGTGGTAGCACTATAATATTTCCCAGTCC TATATGATTTATCTAGTATTCTAATAATTGTAATGATTGTGCAAGTAGTATCTATATGCCATGGCACATCTATCAATAACATTATAATTGTTAACTATCC CTCGCCTTGCTTTTCCTATTTATGACAATAAATCTTGCACCTATATTTGAAATTTGTAATATAAAAGTCCATTGTTAGACAAATAGTACCACTTTGAAAT TTGAAAATACCAAATTAACTTTAAGGTTAAGTTAGATTAAATGGTCCATTCTAATATGGAATCAGAGTATCTTAATAATATAAGCGTTTGGACTTGTGAG GGAGGGAGAAGTGCAAAGATTAGGAAGGAAATATTTTAAGAATATTTGATTCTCAAGACA BLAST |
Tissue | pods |
Gene name | LI_gene_131042; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_524757
Blastp | Ribonuclease 1 from Arabidopsis with 27.92% of identity |
---|---|
Blastx | Ribonuclease T2 from Homo with 30.07% of identity |
Eggnog | ribonuclease T2 activity(ENOG4111M7G) |
Kegg | Link to kegg annotations (AT2G02990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447192.1) |
Pfam | Ribonuclease T2 family (PF00445.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |