Ll_transcript_328945

• Id Trinity: TRINITY_DN39525_c0_g1_i1
• Name Transcript: Ll_transcript_328945
• Sequence: GAAAAGGTTGGGAAACCATACAATTGGACCAACCAAAGACACATATCGATCATAACTCCTTATTACCAATAGTTATGGCCAAGTTTCCCACGACATAAAA CACCACAGGCTAATACTTCACCCCTTACTAACATAATAATAATACAAAACCGAAAACCAGAATCAATCATATTTCTCAACTTTTGTCTAATTCAGCAAGT TTGTTTCAACTAACCATGCTTAATTACATTAAATCACACCAACAAAGTCACCTTCTACATGTAACTCTAGCTACAACAATAAAAGGCAGAATTAAAGAAG AGGAAGAAGAACTTGGAATTCTTCCTCTTCTTGTTTCCATTATAATCTGATTTGAAGAACTTTGATGCTTGAACATGGGTCCTCAAGCTTCCAAACAGGT TGAGAGACGAAAGGCACTCCATAAAGAGAAGAAAATTCTCTCTGATCTTGGATTCTCCTCAGGGGATGATTACCCTGGTTCAGATTATCATCCTACAGAT AGAAAAAATTGGATGTTTGAGCTTGACCCAGAGAAACTTCATATAAACAAGATTGTTTGGCCAGGAACCCATGATTCTGCAACTGACAAGATTGGCATCC CATTCATTACTCGCCCTTTTGCACAATGCCAATCCTTATCCATATACAATCAACTTGTGATGGGCACACGCGTGTTCGATATTCGCGTGCAGAAAGATCG CCTCGTTTGCCATGGAATTCTCCTTACCTATAGTATTGACATTGTCATCAAAGATGTCAAGAAGTTTTTATCAGAAACTGAGTCTGAGATTATCATCCTT GAGGTTAGGACTGAGTTTGGACATGAAGACCCTCCTGAATTTGACAAGTACCTAGATGAACAACTAGGGGAATACTTGATTCCACAGGATGACAAAGTTT TTGAGAATACTATTGCAGAGGTGCTTCCAAAGAGAGTTATATGCGTTTGGAAACCGAGAAAATCGCCGCAGCCGAAGGCGGGTAGCAATCTCTGGAGTGA AGGGTATTTGAAGGATAATTGGATCAACACAGATTTGCCATCAACTAAGTTTGATAGCAATTTGAAGTATTTGAGTGAGCAGCAACCAGTTACATCAAGG AAATACTTTTATAGGGTGGAGAACACTGTTACTCCTGTGCCTGATAACCCTATTCTGTGTGTTAGGCCTGTAACTGAACGCATTCATGGCTATAATAGGC TCTTCATTGCTGAGTGCTTCTCTAAAGGGTATGCAGATAGGCTTCAAGTTTTTTCTACGGATTTTATAGATCAGGATTTTGTTGATGCATGTATTGGACT TACTCATGCTAGGATTGAGGGTAAAGCCTGAAGTTCTGTGTTCATATCACTCTCAGTTATTGCTCTGCTATGTATTTCCATTTTCCAATCAATTTTTGTT TTTTTTTTGTTGTAGTTTCTGTTTTCTGCATCTTTCTCTCTGCATGGATCATATCATCATGGTTGATGGGGTCAGAAATCCTATATTTTTTTTGTTTGTT TGCCGACTCATATTGTTTCTCAGTGACTATGAG
• Tissue: pods
• Gene name: LI_gene_131129;
• Additional information: details;

Expression of Ll_transcript_328945

FPKM

• PAB: 1.8
• PNAB: 0.7
• PS1: 0.3
• PS2: 0.4
• PS3: 0.6
• PW1: 1.2
• PW2: 1.6
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_328945

• Blastp: 1-phosphatidylinositol phosphodiesterase from Listeria with 34.23% of identity
• Blastx: 1-phosphatidylinositol phosphodiesterase from Listeria with 35.56% of identity
• Eggnog: phospholipase C(ENOG410ZKFY)
• Kegg: Link to kegg annotations (lmo0201)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465267.1)
• Pfam: Phosphatidylinositol-specific phospholipase C, X domain (PF00388.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;