| Id Trinity | TRINITY_DN39824_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_524707 |
| Sequence | TTCAATTTGTGTGGCAAATATGAATGATGCCATATCAACCATACTTAACCACTAAGCTTCCCACCTCTCTCTACCACTATAAACAGACACATACCCCAAC CGCACAAACACAACACACATATTTTTCCACAAAAAACACACACAAACATAAACAAATATCTCTCTTATCATATCATATCATTGTTATCATTACGATGGTA GAAGAAGGTGTTGTGGATTTCAATAATTTACCAGAAGGTTGCATAGCAAATATTGTTTCTTTAACTACTCCTCGTGATGCTTGTAGACTGTGTTTGGTTT CATCTACTTTTAGATCTGCTTCTGAATCTGATGCTGTTTGGGATAAGTTTCTTCCATCTGATTATCAAACCATTGTTTCCCAATCCTCCTCCTCTTCTTC ATCTTCTTCTTTCCCTTCCAAGAAGCACCTCTTTCTCTTCCTCTCTCAAAATCCACTCCTCATTGATGAGGGTAAAATGGTAACTTCACGTATTTCTCTT TCATTTTTTAATTATTTTAAAGGGCATTAATCTTTAATATATTTTACTGTTCATTGTGTAAATTATTAACACGAGTGTTCAAGATCTTTGATTCCCCTTA AGAAAGTCTCGAATTTGAGTCTTATTGATAAAAAATGCCGCTAAGAGAATTAGCCTACATACTTGTAGATGTTATCGGCTCTGACATGATTAGTTACAGT AGTGCGAGAATACAATATGCATTATTTTGTATATTAAATTGTTCACAAGTTTTTATTTTTTAGTGACCCATTTTATTAAGAAATATCAGTTGTCCTAATT TGACCAAATAAATAAAAATCTAAATTAGTAGTCCGATGATTAATTTGCCTCACTTTTGATATTTTTGGTTTTTGAAATCAATGTCCTAATTAGACGTAAT TTTGAGGGATCAAAATCGGTGTTTTTATTTTTTTATTGATGAGAACATTGATTTCTTTTTCGTTAAAATGTATGGCAGTGATGCAAGTACATGTAGATGT GCAAAGATTGTATTTGGTTTAGTTATCACACATTTTTGTTACTATATTCAGCATCATGGAAATATTTACACACATAAATAAATAGGATATCATTCATTAA TTAATGTTTGATACATGGAATGGTATATTCAGAGTTTTCAGGTGGATAAAGTAAATGGGAAGAAATGTTACATGCTATCTGCAAGGATGCTATATATTGT TTGGGGAGACACTCCCAGGTATTGGAAGTGGGTTTCTCATCCAGATTCCAGGTAACTATTTCACTACTCACATTTTAACATTTTTAATTTGGGTAATCTT AATCTATGTCCAATGTTAATCAGTTTCTGGTTAAGGAATTAATTATAGAAACATATCGTGAATTAAGTGTATCGTTTAATGATAATGAAAAAAAAAACAA TTTGAATTTTTTAATTGACATCGTTTTTCATTGGAGCATGATAGAATATGAGACTATAGATCTTTGTGACACGACGTCAAGAGAAAGAAGATGATATATT CTTATAATAAATTCTCATATCATCATTACAAGAAAGTGACATATGTCATAAAGTGATACTTTGTATAATGATTTATTTATTAATAATTACTCGTATCAGA ATGTGCCACACATATTATGTAATAAGTGGTGTTATCTTGTTAACTCAATCAGTTAGAGGTAGAGTTGTAATTGATGAATTTGTTAATTGCAGATTTTCTG AGGTGGCTGAACTTGTAAGTGTATGTTGGTTTGAAATCCGAGGCTGGATCAACACTAGGTTGTTGTCTCCAAATACATTATATGCAGCATACTTTGTGTT CAAGCCAAATCCTGTTGGAGCCTATGGCTTCGAATTCCAGTCAGTCGATGCCTCCATCACAATCGATGGAGGCGAATCTAAGGACCGAATCGTGTTCTTG GATGCAGAAAGGGGAAGAAGGCTAAGGTACCAGATTGTACCTCGTCGTGGTGGCATATTCAACAGAACTCGCTTCGTCCCCGTTGTTGAAGATAATAATA ATAACGCCGACGATCTTCAGTGTCCAAAAGAGAAAGGAGATGGGTGGTTAGAGATTGAATTGGGAGAGTTTTTCAATGAAGGGGGTGAAGATAAGGAAGT GGAGATGGGTGTTTATGAGATAAAAGGTGGTGATTGGAAGGGTGGCCTTGTTGTTCAAGGAATTGAAATAAGGCCTAAACTACATTCATAGATAAATGAT TTCTTGCAAGTGTTTGTATTAATGTTGTTTCACTTTCATGATTGTGAAGTTATCATCATATGACCAAATTGTTACCATTTTAATGAATAATATCTTTGTT TCGACâBLAST |
| Tissue | pods |
| Gene name | LI_gene_131438; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_524707
| Blastp | F-box protein PP2-B10 from Arabidopsis with 42.07% of identity |
|---|---|
| Blastx | F-box protein PP2-B10 from Arabidopsis with 42.07% of identity |
| Eggnog | F-box protein(ENOG410YD6D) |
| Kegg | Link to kegg annotations (AT2G02360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439896.1) |
| Pfam | Phloem protein 2 (PF14299.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |