| Id Trinity | TRINITY_DN40055_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_361377 |
| Sequence | CCTTGCTCTCATTATATATACTGTGTGTATACATTATCCGTTGTCAGGGGAAAGAAGAGGAAGCAACAAACCTAGTAGTGCAAGTTTCTTAGCCTTCAAA GAATTTTATTATATCACCTTTTCATTCTGTTGCTCGCGTTAATACTGAATCTTCACACTCTTCATCTTACCTCAGGTTTATTTTATCTGGGAGAAAGTAT CAATGTCTTCCTATTACTTCAATCCTATCCCTACTAGCGTTCATCTCATTCCAGCAGGCGTGTCCAGAAAACTCAAGATTCCAAATCTTATTCACAGGAA AAAGAGGTGTGGTACCTCCTCAAGATCTTCAAACATTACAGCCTTTTATGGCCTGAAGACCCCTCCTTATGAACTTGATGCATTAGAGCCATATATGAGC AAGAGGACACTTGAAGTCCATTGGGGAGAAAATCATAAGAACTTTATAGATGGTTTGAACAAGCAGCTGGAGAAGGATGACATACTATATGGTTACACCT TGGATGAATTAGTCAAAGTGACATACAACAATGGCAATCCCTTACCTGAATTCAAAAATGCAGCCGAGGTTTGGAATCATGACTTCTTCTGGGAAACCAT GCAGCCAGGAGGGGGTGATACGCCTAAACTACGTCTACTTCAACAGATTGAAAAGGATTTTGGATCATTTGCAGATTTTAGAGAGAAGTTTATAGAAGCG GCCCTCGGGTTATTTGGTTCTGGCTGGGTTTGGCTAGTTTTAAAGAGAGAAGAAAGGCGACTAGAGATAGTTAAAACTTCAAATGCCATTTGCCCAATTG TGTGGGATGACATACCGATTATCAACTTGGATTTGTGGGAGGTATGATTATCTCTCCATCTCTCAAAAATTGAACTAGTAGATGCACATATAAATTACAT AGGAAGAACATTTATGCTGTCACCGCTAATTGACAATCTTTTCCTTTTTTGCAGCATGCATACTATCTGGATTACAAGAATGACAGAGCAAAGTATGTGA ATGTATTTATGGACCATCTTGTGTCTTGGAATGTTGCATTAGGACGCTTGGCATGGGCACAGGCTTTTGTGAACTTAGGAGAACCTAAAATTCCTGCTAA ATGATATTTTGAAGTGCTTAATGGTTACAGTTCATGTAATGGGGCATATTGCATCTTGGGTGTTGTTGTAGAATTCCAGGACTTGACATGGTCACAGGTT TTTTGATCATGTGGCCAAAAAGGAAAGAGAAGGTTTTGGTCATTGTTATTCATAGTGCCCCATGTGTAGGGAAGTGTAGGTTGTTGTAGATCTTTGTGGT TGTCAATTTTTACTAGGCTAGGATTAAGGAAAACTAGGTATAAGGATGGATCAAATGTACTTAGAGCATGAGGCAAGAAATTCAATGTATTACAATTACA ATCAAATTTTCAACCACTATTGGGTTAGCTACATAGATCTAATGATTGTATTATTTTCTACCATCTCAATATTGTTAAAGTTGTATCAGTCATCAAGCCA ATTATGGTATTGGATCATTACTTCAACCAAAATAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_131688; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_361377
| Blastp | Superoxide dismutase [Fe] 3, chloroplastic from Arabidopsis with 66.03% of identity |
|---|---|
| Blastx | Superoxide dismutase [Fe] 3, chloroplastic from Arabidopsis with 66.03% of identity |
| Eggnog | Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity)(COG0605) |
| Kegg | Link to kegg annotations (AT5G23310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462492.1) |
| Pfam | Iron/manganese superoxide dismutases, alpha-hairpin domain (PF00081.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |