| Id Trinity | TRINITY_DN40109_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_502704 |
| Sequence | CTCAAGATAAAGAGAATTGAAAGTTATTATAGTTTGAAAACCCGCTCAACTCTAAACCCTAAAAACGCACGTGCTACTCTCCGGCGTTGCCGAACTTCGC GAATCGCCGCCGCCGAAACCGTCTCCGCCGCTGCTGCCACGCCTTTCTTATCAAATTTATCTTTTGTAATTTCAATAATGGTGGGTTTATCACTTGGAGA GCAACATTTCATTCAAGGTGGTATTGCTCAAGACCTTCGTTGTGATGGTAGGAAGAGATTGGCTTATCGACCGATCTCGGTTGAAACCGGAGTCATCCCC CAGGCAAACGGTTCAGCGAGAGTTAGGATGGGTGCTACAGATGTCATTGCTAGTGTAAAGGCTGAACTTGGAAAACCAAGCTTATTGCAACCTAACAAAG GGAAAGTCTCTATAAATATTGATTGCAGTTCGACCGCTGAGCCAGCTTTTGAGGGTAGAGGGGGTGATGAGTTATCAGCAGAACTATCAACTGCTCTTCA ACGCTGTCTCTTGGGTGGGAAAAGTGGAGCAGGTGCTGGAATTGACCTCTCCTCACTTGTTGTCATCGATGGAAAAATTTGTTGGGATCTCTACATTGAC GGGCTTGTAGTTAGCTCTGATGGGAATTTGTTGGATGCACTAGGCGCTGCCATTAAGGCTGCTTTGAGCAATACGGGTATTCCTAGAGTCCACGTTGCTG CCGGTGCCTCAAGTGATGAGAAACCAGATATTGACGTAAGTGACGAGGAGTTTCTGCAGTTTGACACATCTTCAGTCCCTGTTATAGTTACACTTACCAA GGTTGGAAAGCACTATATCGTGGACGCCACTTCAGAAGAGGAATCACAAATGAGCTCTGCTGTTTCTATTTCTGTTAACAGGCAAAGGTCCATCTGTGGC ATTACGAAACGAGGAGGTGCAGGGCTGGATCCAAGCATCATCCTTGATATGATATCGGTGGCTCAGCACGTGAGTGAGCAGTTAATTAACAAATTGGATT CAGAAATAGCTTCTGCTGAAGCTGGAGATGATGAGTCATGACTTAGATCTTAGTGGTAATTAGGATGTGTTGTACACTAATGAAGTGGTCTACCTGAACT AAACTTTGTATTTTGGTAAATTTTGTTAACTATGGATTACAATCTGTTAGTGTATGTCAGAATTATTGTCCTTGGTTGCATTGACCTGTCTTAGGCATAA TGAGATGGTTGTTTGATGCCATGCAAGGTTTCAATTTGTGGTCGTGTTGGTGAATGATGTGGTGCACAATGTTTAAATACAGTCTGTAATTTCGGAGTGC TTCATTTGCAGCTACCACCAACCCAAATGTCATTAACAAAAATGATTCATATCTGTGATTTTTGATATAATCAACATGCTCATTTTTCTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_131752; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_502704
| Blastp | Exosome complex component RRP42 from Homo with 40% of identity |
|---|---|
| Blastx | Exosome complex component RRP42 from Homo with 40% of identity |
| Eggnog | Exosome complex(COG2123) |
| Kegg | Link to kegg annotations (23016) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462378.1) |
| Pfam | 3' exoribonuclease family, domain 1 (PF01138.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |