| Id Trinity | TRINITY_DN40126_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_502794 |
| Sequence | TCAACTTCCTTATAATTATAAAATTACTTGACAATTATAGTTCTCATTATCTCACATTCATATATTTGATTTCTCTTTCTAGATATCATTTCAACAAAGC AGAAAGTGGGTTCCATTCTATGTCAATTATTTAATGTCAAAAAGATAAAACAAATGGTTATCAAAAAGCATTACCATTACAAAAGAAAGTCACATCACAA TCCCTGTACCAAAGAATGATTGCTTTAAACATGTTGAAGAAGTTGCTGTGTAAACATAGCTGATTAAGAAACCCAATTCTCACTACTTCCCTTTTGATCA AATTTGTAGTACTTATAAAATTACTTAAGAGTTACCAAGTATCAAATTCCAAGAAATAACTTACTTTTCAAGTATTACTATACTCCATCATGGCTGGAGC ATCCTCTAACATTCCAACTGAGATTGTAAGCCATGAAGAGATGCTTTCAATTGAAGCTGTTTTAGCTTCTGCTTCTGCAGCTTCTTCTCCTGTAACTCCT CCTTCAATACATTCACATACTTCAGTTCAAGCCGAATCAAATAACTCGATTTCGGTTCGAGCTAAGAGAAGGCTATTCTACTCTGCAGAACTTGATATAG AGGATTATGGAAAGATGGTGATGACTAAGAAGAAGACCAGAGTAGCCGAGACATTACTACACCGGTTTAGGAGCAAGAGGGGCTTGTTTGTCACTGATGT TACAAAGACAGAATGGTGTGAAAAGCAAATGGAATTTTCTCTCTTTTTTGAAGAATGGAAGAGCAACAATGAAGAAGAATGGTGTAACAAAAAACAAAAG GATTTGGCTCTTGTTTATGGAGGAAGGAAGAACAATGAAGCCAGAAAAGCTGGTATAGCTAGGCATGTTCAACTTGAAAAAGAGGTTCTAAAACGTGTGG AAGTGGAGGTTAATTCAGAAGAAGATTATATGGCATTGAAGCTTGTTAATTTCATAAGTGGTGTGAATCAATTGATGTTTGAAGGATTAACACGTGAGCT TCCTATAGTAGCTTTTGCTTTTGAAGAAGGTATATGGATGGTGGGAAAGATTGATGAAATTCGTATGTCTATATTAGAAAGTGATCACAATCGTAATCGT AATCGTAACCCAATACTGGTTGAGACAAAGACTCGTGCCAGAGACACAATTCCTGCAGAGGCACAGAAAAGAAATGGAAGGATTCAACTGATGTGTTACA AGTATTTATGGGACAATTTAGTTTCTCATCACAATGATTTCCCTTCTAAACTTTTTTTTGAATATTTTGGGTTAAATGGTAAATTTACTCTAAGTGAAGA TATTCAAGGAGCATGTGCTCATTCTGGATTCTTTGCAAGGTCCCTTAATGATGTGGTAACATGTTACAAAAATAGTTGTAAGATGTTGCCTTTTGCTCAT AATCAACTAGTGATAAGATATGAGTATCAGAAAGATAGGTCCCTGATAGATGAAGATAAATTTTCATATGATGATGTTTGGCTAAAGAATAAGATTAGGA ATTGTCTTGAGTTTTGGGTTGGAGGTAGAGATGCAACTTATGCTGCTGATGAAGAGGAGTGGAAATGTGGGTTCTGTGATTATGTTAATGACTGTCCTGC GTACTCTGACATGAGTGATAGCACTGAATCTTTTCCAAGTGATGAGTCATATCCAAATCGAAGGTATTATCTTTGGTGATTAGAAAATAATGTAACAGTG AAATGGCCTCTAACAAGTTGTTTGTGATAGAGTATTACTTAATTTAGTAGATTCGTGTTAGTTCATCCTTATAGTGGATCTCACATATTGAGACTCCGTT GTTATAGTATCCTTTGTAATAATTTTATGTATGTGTAATAACCACTATTATTATAAGCATAATTTTTAAAGATTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_131772; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_502794
| Blastp | Exonuclease V, chloroplastic from Arabidopsis with 42.99% of identity |
|---|---|
| Blastx | Exonuclease V, chloroplastic from Arabidopsis with 42.72% of identity |
| Eggnog | Exonuclease(ENOG4111IID) |
| Kegg | Link to kegg annotations (AT5G60370) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441455.1) |
| Pfam | Exonuclease V - a 5' deoxyribonuclease (PF09810.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |