Ll_transcript_502792

• Id Trinity: TRINITY_DN40136_c0_g1_i1
• Name Transcript: Ll_transcript_502792
• Sequence: GAAAAATTAATTTGTATGTGAAATGAATGACTTAGAAAATAAAATCAACATGAGGTTGTGATGTGTTATTGTTTCTGCTTCTGCAATGAATCTTCAATCA AACATAGATAGATCTTAATCTTCCTTCTCCTTTCTTTATCAACGATTCAACAACACCAACATCGTTTTTCTCCTTCATAACAACAACAACCTGGGACCAT GTCGGAACACGGCGATTCCCACTGTTTTTCGAGGACCCTTTTAGCAGTGAATGTTGCTATTGCACTTTTTCATGGAGTTATTGCCTTTCTTTCCTTTTTC CAGTTGTTGAGAATTCACATGAGAAATGTACAGCTTCACTGGACACGGCAAAAAGTATTTCACATATTGATTGGCTCTTCTAATTTCGGTTATTTCATTT ATTCGATATTGTCGCTTATTGCTGCTTGCAGTGGATGGACGTTTTGGTCCCACTCTTGTGGTTTTATCTTTATGGCTTTCCCCAAAATACTTCTTTTTGC AGCATTTCTTCTTCTTTTATCCTTCTGGGTTGACCTATGCCATCAGCCAAATGATGACTATGACTATGAAGGAAGTTTTTGTGAGGAAGGTTTACTGGAA AAGACTTCAAACGAATTAGCAAGCATAGACAATAATAGAAAGTGCTTTCCTGTTCGATTTTCTCGTGTTGGAACTCGACAGAAGATTGTGATTCTGGTTG CAATGCTAGTTTTCATCACCATGATGGCATTTGCTGTAATAGTCTGGATCGGGCTAGGACAGAATCCCATTGATTCTGAAGTGGCTGTTGAGGTGTATTT AGATCTGTCTGCTATTGTAATGCTTTTGTTGGGAGGAGGATTAGCATATTATGGAACCCTATTATACTTGAAGATGAGCAAAGTGAGAGCTGAGAAACCT TCATCTGAAATGTGGAAGGTTGCAGGCTTAACTATTGTCTCCGTAATATGCTTCACATCAAGTTCCTGTGTAGAACTTTTAACCGACATTCCTATGCTGC ATGACTGGCATCACTATCGCCTGAATGACCTTTACACTTCTCTTTTACTCATTTTGTATTATTTTGTTGGTTCGTCGATACCTTCAGCACTGGTACTGTG GGTAATGAGAGAATTACCACACGCAGAATCTGATAGCATGCAAGAAGAATCAAGTACAATAGCTTTTGTTGCTGATAGTTCAGTTGCAATTCATCATTCT CAGCGCTGGATTACCGCAGCTAGCATGCAGAATCAGGCATCAAGAGCAAGTCCCATATAATTATCATGTGTGAACCTTTCCAAATTTATCTTCTAGTTGT GCCTGAGTTTGTGCATCCCATTGGAATTTATTCAGAATATGTTCAATCCTGGAGCGGAGCCGAGAGAAATCGATGCCGACGGATGCAAGCGCGCTAGGGA CTTGAGGTCCCCTTTGTCAATGTATTTACATTCTAAATCTACATGTATATAGAACAATTTGATATATGAAATTTTTTTGCTACTGTACAAATTTTTGATG CTATTGTGGTTCTGGATTCTCATCTCAGTTTTGATTAACTCTTGTCTTATGTGAATCTAGCTTTCAAAGTGAGCTTGTTCTTCTAGTCTGCTTTGCAAGA TGAATCAATTCTGAGATCTTTTTTGTAACTCATCTCCGAGTTTTTCGTGACTCGTAGCCGCACTCGAGTAACTCGATTAACTATCTAGGTAGTGCGTAGA TAAAAT
• Tissue: pods
• Gene name: LI_gene_131780;
• Additional information: details;

Expression of Ll_transcript_502792

FPKM

• PAB: 6.3
• PNAB: 7.2
• PS1: 5.8
• PS2: 5.8
• PS3: 7.5
• PW1: 5.3
• PW2: 6.7
• PW3: 5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_502792

• Blastp: Tobamovirus multiplication protein 1 from Nicotiana with 21.25% of identity
• Blastx: -
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447841.1)
• Pfam: Protein of unknown function (DUF1084) (PF06454.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;