Ll_transcript_336430

• Id Trinity: TRINITY_DN40283_c0_g1_i1
• Name Transcript: Ll_transcript_336430
• Sequence: CCATATATTATTTTCCACCTTTTTTGGTATTCCATAAATACAAACATACACAGAATTTAGGTGTGTCGTGGTTGCGTGAAGGTGAAAAGGAAGGTCGAAA CCTACGAAAATGGCATCATCAGCATCGGAAGAAGAGGTAACACTAACGGTGAAATGGAGTGGAAAAGAATACACAGTAAGAGTGTGTGGTGATGACACTG TTGGTGAATTGAAACGCCGAATCTGTGAGTTAACCAATGTTTTACCCATTCGTCAGAAGCTTCTTTATCCAAAAGCTGGTTCTAAACTCAACGATGATTC TCTCTTTCTCTCCCAACTTCCTCTTAAATCCTCTTTCAAAATGACCATGATTGGTACTACTGAAGAAGACTTAATTGTTGATCCTGTGGAGTCCCCTGAG ATTGTTGATGACTTCGAACTTGGTAAAGAAGAAACTGTAGACATCAAAGACATGGAGGTCAACAAGCAAAAGTTGATCAGACGTATCAGTCAATTCAAGA TTGAGGTTCAAAATCCATGCCGGAAAGGAAAGAAACTCCTCGTTTTGGATATTGACTATACCCTCTTCGATCATCGATCAACTGCTGAGAATCCTCTTCA ACTCATGAGACCTTGTAACCATCATCTTTATCATTGTGCATACTTTTTGTTGGCTTCCTTGCTTTCAGTTATTTTTTGCTTGTTTCGAAGTTTATATTTT CTTGTGCAGACCTTCACGAGTTTCTTACATCAGTTTATTCAGAGTATGACATTATGATATGGTCTGCAACAAGGTGCCATCATTGATTATATTCACTCCT ATTGTTTATAACTGTATATTTGCAATCTGATTCTGTTGAGAGAATAACTATGGAGCACATAAATTCTATACATGATACTAACTAAACTGTTACCTTTTTC ATGGATTGAAACGGTTTGCTTCATGCAGCATGAAGTGGATTAAAGTCAAGATGGGGCAACTTGGGGTTCTGGACAATCCTAACTACAAAATCACAGCACT TCTTGATCACATGGCAATGATCACTGTTCAGTCATCATCCCGTGGGGTCTTTGATTGCAAACCACTAGGTTTGATTTGGGCTCAGTTCCCTGAGTTCTAC AGTGCTTCAAACACTATCATGTTTGACGACCTTCGAAGGAATTTTGTGATGAACCCACAGAATGGTTTGATAATTAAACCATTCAGGAAGGCTCATGCGA ACCGAGATAGTGATCAGGAGCTTGTGAAACTTACCCAGTACTTGCTGGCCATTGCTGAGCTTGATGACTTGAGAAACCTTGATCATAATAATTGGGAGTT ACTCACTGAGGACAATGGTAAAAGACGTCGGCACAGATAAGCGAATCTGGTAAACAAGACACAGCTTCTAAACTTTATACAAACTGCAGTTTTATAAGCC AGAGTATTTCAATCTTTCATTTGAAGTAATGATGTTAGGAAAGGGTAAATGACAGAAAGGAAAGGATTCCTTGTAGCAGCAGTGTGGGGGAAACTAAGAT GACTAGTGCTACTAATAATTTATATGCCCTTATTCCTGAACAGAATTTGATTTGATGCATGAGAAAATTATATGCTTTTATAATTTGTTACAAAGCTTGG ATCATTTTGTGTATGATGGCCTTATCTTTCTTTAGCTTCAATGTATATTCCTTCTTTTATATGATTACCATTTACTAATGTCAGGTTATACACATAAATG ATCACTGTTGCAAAATGAGATTGATTAGTTGTGTAACTAACTATCCAAAGTAATAAACAAATTCTACTTCTCACAAGTTTCCTGTT
• Tissue: pods
• Gene name: LI_gene_131961;
• Additional information: details;

Expression of Ll_transcript_336430

FPKM

• PAB: 0.5
• PNAB: 1
• PS1: 1.5
• PS2: 0.6
• PS3: 1.1
• PW1: 0.3
• PW2: 0.8
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_336430

• Blastp: Ubiquitin-like domain-containing CTD phosphatase from Arabidopsis with 74.43% of identity
• Blastx: Ubiquitin-like domain-containing CTD phosphatase from Arabidopsis with 74.01% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (AT4G06599)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464724.1)
• Pfam: Ubiquitin family (PF00240.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;