| Id Trinity | TRINITY_DN40308_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_444755 |
| Sequence | GGAAAAAAGAATATGACATGAATGTGGAGAAAAGAGTGATAGGTTCCTTAGCCCCACCGTAAGACATAGAAGCAGTGGTTTCCTTCATCCACCGCAGTAA CTCTCTCTCTCTCTCTCTCTCTAAGCTAAGCTAAACCTGAAAGACTTCTTTCTCTATCTTCAATTTTTCATCTTTTATATGAACAGTTGAGCAATCATTG TTCCCATTAAAGGCTTAGACTTTAGATTGAAATCAAAGGTTTTTGTATACCCTTAATTGAGAACATTCATCAGATATGGAGAATTCCCGAGATCAGCCCC TCCCTCCAGGTGTTCACTCTTGGCCTAACTATTCGTCAAACTCAGCTCAACCAATGCATTCACTCCTCCCTCCGAGTCAGATACAGCCTGGTGAGATCAG ACCTCAATATCACTCAAACTATCCTGGATGCTATCAGTTTCCGCCGAATGTGAATGTGTATACTCCTGCCAATGGGTCTCATCATACCTTTGCTAGTAAC GCCTCTTGTAATTTTCAACAAGGAACTCTCTCTCAATCTGGTTTTGTTACTTGTCAAACTGTAGCCTCAGAGCCCCCTCCCACTGTAAATTCAACTGAGA AGCAGGAACAAAATAAGTTTTCAAACCACCATGTTGGTGGAGGAAATCAGAATGTTGACAATACTAATTCAGAAGCATTACAAGAGTCCGTTGCCAATTT TACGCAGAAAGTCGGTGACGCTGCTGCAATGAATAATGTGTCTACCAATTGCTCAAGAGTACAATTAAACTATAGCGACATTGATAATGCTGCCCAGGAT GCTGTCTTACGTGAACAAGAAATTGCCACCCAAAATATCATTAGGAGTCAAAGAGAGGAAAGAACTTTGGCTCCACCCACTAAGGATAATTTAGACATAT TCTCAGAACGCCGTGACCCCAGTGCTTTGAAGGATCATCTATTGAAGATGGCCACAGAGCACCGGGCTGAAATGGCTGTTAAGCGTGGGAAAGCTGCACA TCCAGAAGAAGGTAACACTGAAATTGGTAATGGATATGGTGTACCTGGTGGAGGTGCATATTTTGATGCTCACGCGCGTAATATTTCTGAAGGTAAGAAT AAAGAGGGTCAACTTGAATCTAAACTTGATAGAGTTTCAGAGCAGAAACCTGCAGCCAAAGAATTGCCTGAGTATCTAAAGCAGAAGTTGAGAGCTAGGG GTATTCTCAAAGATGATACACACAGTAAGGATGTGAAATGTACTCCAGCTGAACACAGGGAAACTGAGAAGTTGCCTCCAGGATGGGTGGAGGCAAAAGA TCCTGGAAGTGGTGTATCTTATTATTATAATGAAAGTACTGGGAAGAGTCAATGGGAAAAACCTCATACAGCTTCCTTAGTTGTGGAATCACCACCGTCT TCACATCTTCCAGAGAACTGGGTGGAGGCGCTGGATGAAACAACAGGTCATAAATATTACTACAATACAAAAACTCACGTATCACAATGGGAGAGTCCTA ATTCAGCTCGGGAAGTCGTGTCTGCTCACAAAGAATTGTCTGTAGCTGGTGGGGATAATCAGCCATCTAATTTACAGAGGTGCACAGGATGTGGTGGATG GGGAGTAGGCCTTGTGCAGGCATGGGGTTACTGCAAACATTGCACAAGAACTCTGAATCTTCCACAATGCCAGGATTTGTCCTCAAGTTTGAATAATCAG CAAAGCAGTACTGCACATCTCTATGAAAGTTCCGATAAAACGACCAACAAACCGAGGTCTAATTGGAAACCTCCATTTGATAAGGGAGGTAAAAAAGGAG GTAAGAAGCGTGCACTTGAAGATGATGACGAGTTGGATCCCATGGACCCTAGCTCTTATTCCGATGCTCCGCGTGGTGGCTGGGTTGTGGGTCTAAAAGG TGTGCAGCCACGAGCAGCTGACACAACGGCAACGGGTCCTCTCTTTCAACAACGACCATATCCATCTCCCGGAGCTGTTTTACGGAAGAATGCTGAAATT GCTTCGCAGAAAAAGAAACCAAATTCAAATTTTACAGCCATATCCAAAAGGGGTGATGGGAGTGACGGACTTGGTGATGCAGACTAGGACTACTGGTCAG CATAAACATGTTCTCCTTTTTGCTCATGCTTTTTGCGCCAAGTGGATGAAATCTATCATATACATTTGACTCCAGTGTCCGTTGGTTATCGAAGAATTCA TTTCGTTGGCAAAACCAGCTATGCTGTTGTGCAATAATAGTGTCTACTTTTGCTGCAAAAACTGAGCAAATTGGTAAGCACTTCAATGCTACAAGTAAAC TATTGTGAAGAAGCTGTCATTATGAAACATAATTGGCACTAATATATTTGAAGCACTCTGACAAGGTAAAAACTTGCATCCAATATGGTTGTAGTCATGA GCTGAATTATATGATTTCACAAATTTAAATTTCTTGAAAACTTGAAGATTAGGAATGAGAGTATCTTATGCATTTTGTGACCTTTTCTTTTTGTTCATTC TTTATTCTAGTTGGTCACATTATGCCATATATACATGTTTTTTCATTATGGTACCAGAGGGTTTTATGATGGAGGTGATTTCCTGGTCTTTTTTGCCTTG AACACCTTATTTGCTCAGCTCTAAGGAGTTTGGAGAATTTGGTTCATGGAGACTAAGTTTCATAGGATAGTGAGACTTCAAATTTAGAGCTTAGCTTGGC CATCTAAAACATTTAATTTGATTGGAAAGTTTATTTTAAAGTATATTTTAGTTTTAAGGCATTTATATAGATATCATGCCTAGGCCTCAAATAAGTATGA GCTAGTGTTGATCATGTAGTGTAAGACTCTGCTAGATCTCCATAAAGATCAAAATGTTAAGGGTTCGATTTTTTGGAGCAAAACTTGAGAGGGACAACTA CATATCCTCTATAAGATTAGTTCCTTATTCAAAAGGTAATGAAATACTTTTGGTATTACTAAAAAAAATTATCAGCTTTTAAAAGCACTATTTCAAAAGG TAATGAGATTAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_131992; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_444755
| Blastp | Polyglutamine-binding protein 1 from Bos with 35.14% of identity |
|---|---|
| Blastx | Polyglutamine-binding protein 1 from Rattus with 64.29% of identity |
| Eggnog | Polyglutamine binding protein 1(ENOG4111MHA) |
| Kegg | Link to kegg annotations (534894) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453100.1) |
| Pfam | WW domain (PF00397.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |