Ll_transcript_444760

• Id Trinity: TRINITY_DN40363_c0_g1_i2
• Name Transcript: Ll_transcript_444760
• Sequence: AAATATAAAAATAATTGTTGAGGAATAATAAAGCCATAATGCAATACCCTAATGAAAGATACATAGTGAGGCAGCAGGTTGGTGCGTGGGTGAAAGAGCA GTAGAGTATGGTGACGGGTTCCATAAACGACGTGGTGAGTTCAATTGATATGGAAAAAATGCTGTGCGAATTGTTGGTGGATACGAAGCAACCAATTTGT GAGCGATTCAGAGCTCTCTTCTCTCTCCGTAACCTCAAAGGTCCTGCCCCTCGCGATGCCCTTATTCGAGCTACAAGGGATTCATCTAATTTGTTGGCAC ATGAGGCTGCTTTTGCACTTGGTCAAATGCAGGAAATCGAAGCCATTCCTGCTTTGGCCTCAATTCTAAATGATCTTTCTTTGCATCCTATTGTTCGCCA CGAGGCAGCTGAAGCACTTGGTGCTATTGGCTCAGATAGTAATCTCCCCCTTTTGGAGAATAGTTTGGATTTGGATCCTGCTGAAGAGGTTCGTGAAACA TGTGAATTGGCTCTTCAACGTATTCGCCACTTCAAACATGCTGCTATTAGTCATCAATTATCTGCACCCGATGCGTCGCCTTTTAAGTCTGTTGATCCAG CTGCTCCTGCAACCTCTTCTTTGTCTGTTCATCAACTAAGGAAACTGCTTCTGGATGAAGAAAAAGGGATGTATGCCCGATATGCAGCTCTTTTCGCGCT TAGAAATGACGGTGGAAAAGAAGCTGTTGCTGCTATTATTGATTCCTTAGGTTCTAAAAGTGCTCTCCTGCGCCATGAGGTTGCATATGTTTTGGGCCAA TTGCAAGACAAAGTCGCTTCAGCTGCTCTGTCCAATATACTTAAAGATGTGACTGAGCACCCAATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAA TTGCAGATGAGCAAAGTGTGGCCCTTCTTGAGGAGTTTACAGCAGATCCAGAGCCTCTTGTCTCACAAAGCTGTGAAGTTGCCCTAAGCATGCTAGAATT TGAACGGTTAGGGAAGTCATTTGAGTTCCTCTTCATGCGCAATCCAGTTGTGCATGGTGATGCCTCTTCATAAGGCGCCATGGTTTGCATGTTCATCCTC GACCTCAAGGATGAGGAGCACTTGTAATGTTTCAGTTCTATTTTGCTTGTTATGACTGTAATGTTTGTGCGGATGTGCCACCTTAATTACATATTATTAT TGTGTGTTACTGTTTAAAGCTATGGCTCTTCGTTTGTCATTAAAATAGGTGGCAGTGTATTAAGTTAGAGTCAGACTTGTATCTTCAAAGACATGGCTAA TACTAAAGCTATGGCTCTTCATTTCACAAGTACAACTCAATATATGAAAGACAAGGCTAAGACTTGTATCTTCAAAGACATGGCCAATATCTTCAACCCA AGTTTGTTCGAAAACATATACTGTTTTCCAATGAAAACATGGAATTTTTTATTTCTCAGGCAAAACTTCACCATGGAACTTGTATTCTAC
• Tissue: pods
• Gene name: LI_gene_132050;
• Additional information: details;

Expression of Ll_transcript_444760

FPKM

• PAB: 32.6
• PNAB: 54.4
• PS1: 49.3
• PS2: 37
• PS3: 46
• PW1: 40.2
• PW2: 40.5
• PW3: 36.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_444760

• Blastp: Deoxyhypusine hydroxylase from Arabidopsis with 72.76% of identity
• Blastx: Deoxyhypusine hydroxylase from Arabidopsis with 72.76% of identity
• Eggnog: Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (By similarity)(COG1413)
• Kegg: Link to kegg annotations (AT3G58180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426176.1)
• Pfam: HEAT repeats (PF13646.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;