Id Trinity | TRINITY_DN40469_c0_g1_i1 |
---|---|
Name Transcript | Ll_transcript_470424 |
Sequence | AAACGTTCCAACTTTCAATTTCAATACATATTATTAGTGTCTCTTTTTAACTATATATATTCTTATTATTCTGTGCTCACTTTCACATTCACTGTCTCTT TCTGCTTTGTTGTTGTTGTTGTTGTTCATTTCAGTGTCAAATAGTTTGCAATGGGAAGAGCTCCATGTTGTGACAAAGCTAATGTGAAAAGAGGGCCATG GTCTCCTGAAGAAGATGCAACCCTAAAAAACTACCTTAAGAATCATGGCACTGGTGGTAATTGGATAACCCTTCCACAAAAAGCAGGCCTTAAACGTTGT GGGAAGAGTTGTCGTCTTAGGTGGCTGAACTATCTGAGGCCACATATCAAGCATGGAGGTTTCACTGATGAAGAAGATAGAGTTATATGCACCCTTTATG CTACCATTGGAAGCAGGTGGTCCCTAATAGCAGCCCAATTACAAGGGAGAACAGACAATGATGTGAAAAACCATTGGAACACAAAGTTAAAGAAAAAGTT TTTGGCAGAAAACAACAATATTGGAACAAACAACACTAGTCACATGATCAACAACATTGATAGTCCACAGTTCTCAACTTTCACTCCTCAGCCTCAAGTT GAAGCCTTTTTATTTGATCATAAGAACTCACCTTGTTATGACCCTTATATTTTGGGTTTGGACCAAACACCATTTCCAGTTCCTTTATCAATGCCTTTGG AATTGGATGTTTCAGGTTATGAAACCAGCATGAGTAACAATTGTGGAATTATACCATTTTCTAAGGAAGAGAAGGATAATAATAATACACAACAATGGCT TGGATATGAAGATGGAGATGCTGCCATGTTGCTTGATTTTGTGTATGAAGATTTTCTGCATAACAATGGGTTTGTTTCTCAAGACAAAAGCAGCCAAATT GCCTCGTCATCTATCTAATATAACCAAGGCTTTATCTACTCATACAAAGCTTCACAAGTCTCAGCAACATGATTATAGAATAGAAAATAAAATCATAACA AGGATGGAATATATTATAGCTATTGATTAGTACTAGCTAGTAATTATTAATTGTCTTTAACATTGGATTGTGGTTTGAGTTTGATTTTAGTAGTTGGTGT ATATGGAATTATGTGAGCCTCTTAAACTAAGTTCAAACTTTATGATATTGG BLAST |
Tissue | pods |
Gene name | LI_gene_132177; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_470424
Blastp | Transcription factor RAX3 from Arabidopsis with 80.51% of identity |
---|---|
Blastx | Transcription factor RAX3 from Arabidopsis with 80.51% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (AT3G49690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446415.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |