Ll_transcript_470398

• Id Trinity: TRINITY_DN40489_c0_g4_i1
• Name Transcript: Ll_transcript_470398
• Sequence: CAGAGTTCTACTAAACTCCTACGTAGAACAAAAATAAGAATCGCAAAGCCCATTTCTATCAGCTCATTTCTTTCTTCTTCACCACCATTAGGGTTTTAGG GTTTGATCTCTGCAATTCCGAATCTGCAACAATGTCAGTGATGAACCAATACGGTCGCACCAAGAGCGTAGTGAAACGCTCGAAGAAGTATTTGGAAGAA GCATTGTATTTCAAACTCTTCAAGGAAGGTTCTTCTGATCTCAGTGTTCGACAACAATTGAATCAATTCATTAAGAGTCGAAAACTTGTTTACAAATGGG AAGTTGGTGATACTCTTAAGAAGCTTCGTCATCGCAGTCTCTATAACCCTGCGCTTAAGCTATCTGAAACTATGACGAAGAGGAACATGATTAAGACAGT CAGTGACCAGGCTATACATCTCGATCTACTTGCAAAAGCTCGAGGTATTGCTGCTGCTGAAAGTTATTTTGTTAATCTCCCCGAATCAGCGAAAAATCAT CTATCTTATGGTGCCCTTCTCAACTCTTACTGCAAAGAATTGAATGCTGAAAAGGCTGAAGGTGTGATCGAAAAAATGAAGGAGCTTGGCCTTCCTTTAA CTTCCATGCCATACAATAGCCTTATGACTCTCTATACCAAAGTAGGACAACCAGAAAAGATTCAATCCATTATACAAGAAATGAAGGGTAGCAATGTCGT GCTGGATTCTTACACATATAATGTCTGGATGAGAGCTCTGGCTGCAGTTAATGATGTTTCTGGTGTTGAAAGGGTTATTGCTGAGATGAAGAGAGATGGT CAAGTCACCGGAGATTGGACAACATATAGCAACTTAGCATCTATTTTTATTGAGGCTGGCCAGTTTGAGAAGGCAGAAGCGGCACTCAAGGAATTAGAAA AGATAAATGCCCGCAAAGATCTTTCTGCTTACCAGTTTCTAATTACATTGTATGGACGAACAGGTAACATACATGAAGTTTATAGGATCTGGCGTTCTCT TAGGTTGGCATTTCCTAAAACTGCAAACATAAGCTATCTGAACATGGTTCAAGTGTTGGTTAACTTGAAAGATCTCCCCGGAGCGGAAAAGTGTTTCCGA GAATGGGAAGCTAGCTGCCGCACTTATGATATTCGAGTAGCAAATGTTTTAATAAGAGAATACACAAAATTAGATTTGCTAGAGAAGGCTGAGGAGCTCA AGGAGCGTGCTCGCAGAAGGGGGGCCAAGCCTAATGCGAAAACCTTGGAGATCTTTTCGGATTACTATTTGCAAAAAGGTGACCTTAAGTTGCCAGTGGA TTTTATAGAAAAAGCAGTATCAGTTGGTAGAGGAAATGGTAAGAAGTATGTTCCATCGTCAGAGACCGTTGGTACTATTTTGAGGCATTTTGAGCAAGAG AAGGATGTTGATGGTGCAGAACAATTTGTAGAGATCTTGAAGAAATCTGTGGATTCTCCAGGGGCAGAGGTCTTCGAATCTCTGATTAGAACTTACGCGG CCGCTGGTAGAACCAGTTCCGCAATGCAGCGGCGATTAAAGATGGAGAATGTGAATGTCAATGAAGCCACCAGGAAGTTGCTTGAGGCTATCTCTGTGGA GTGATTCATGATGCTTTTATTCTTTGATGTTTTGGTTGCTGTGAAATTTAGATGCTGTGGTCTTTCTACTCATTTTGCATCAGTAATAAATTCTGGTATT TCAATTTAAACCTTTTCAAAGTGGCACATATTGTAGATCCAAGGTATTAAATCTGGGTTCACAACCATAATTGTGGCCGCATCGAATGATTTTGGTAGTT TCTGCAATTGCAATTGTAGCTGCATCGGCATTATTTTCATGTAATAGTTCGCAATTCTGGTAAACATAATCACAATTTAAAGTCCTGTGTAGACCATTGA TAGCATATTATTTGATTATTGAGTTATGAAATACTGTTGCCATGGCTGCATCTGTGTGCTAGTCAAAGGAAAATGCATGCAATCATGACATGCTGGATCT AACATATAAGCAC
• Tissue: pods
• Gene name: LI_gene_132209;
• Additional information: details;

Expression of Ll_transcript_470398

FPKM

• PAB: 1.5
• PNAB: 18
• PS1: 9.9
• PS2: 10.7
• PS3: 10.7
• PW1: 9.4
• PW2: 7.4
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_470398

• Blastp: Pentatricopeptide repeat-containing protein At1g60770 from Arabidopsis with 64.4% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g60770 from Arabidopsis with 64.4% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G60770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439215.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;