Ll_transcript_468815

• Id Trinity: TRINITY_DN40540_c0_g1_i1
• Name Transcript: Ll_transcript_468815
• Sequence: CAAATAGGACATGATTGATTGACTCTAGTGCAGTGCGATGATACATTAATTTTTTCAAACCATATATGCAACAAATTAATTTTTCATTTCTTTTCATTCT CATTTCAACTCAAACCCTAACTCCTCCATTTTCCTCCCCCAATTCAATCCCCAGGGTTCCGAATTCTGATTTTTTGGGTTCCGTTTCTTACAATTCAGGA GCGCGAAGAAGAACAACTTCCATTTTGCTAAAATGAGTGCTCCGAAAAAGAGACCTTTTCAGATTGAAGCGTTCAAGCACCGCGCTGTGGTTGATCCTAA GTACGCTGAGAAAACGTGGAAGGTTCTGGAACACGCGATTCATGAAATTTATAATCACAATGCTAGTGGTCTTAGCTTTGAAGAACTTTATAGGAATGCT TATAATATGGTGCTACACAAATTCGGAGACAAACTTTACTCAGGACTTGTGATGACCATGACTTCCCATCTAAGAGAAATTTCTCAGTCAATTGAATCTG CTCAAGGAGAAATTTTCTTGGAAGAGCTCAACAGGAAGTGGGCAGATCATAACAAGGCATTGCAAATGATCCGAGACATACTGATGTACATGGATAGAAC TTTCGTACCGAGCAACAATAGAACTCCTGTTCATGAGCTTGGATTGAATCTTTGGAGAGATGTTGTGATCCACTCCAGCAAAACACAGGTCAGGCTTCAA GATACGCTTCTTGAGCTTGTGTTTAGAGAAAGGAACGGTGAGGTGATAAACAGGGGTTTGATGAGAAATGTAGTAAAGATGCTAATGGATCTGGGCTTGT CTGTATACCAGGAAGACTTTGAGAAGCGTTTTCTTTTTGTTTCAGCAAATTTTTACTGTCTTGAGTCCCAAAAGTTCATTGAGTCTTGTGATTGTGGGGA TTATCTAATGAAGGCTGAGAAACGTTTAAATGAAGAAATGGAGAGAGTATCTCACTACTTGGATCCTAGAAGCGAGTCTAAGATAACTCGTGTTGTGGAG AAGGAGATGATTGAAAGTCATATGCACACTCTAGTTCATATGGAAAAATCAGGTCTAGTTATTATGCTTCTGAATGACAAATATGAGGACTTGGGAAGAA TGTATAACTTGTTTCACCGGGTGCCTGAAGGGCTTACAATTGTTAAAGAGGTCATGACTAGTTTTATACGAGAAACTGGTAAGCAGCTAATTATGGATCC TGATAGGTTGAAAGATCCTGTGGATTTTGTGCAGCGTCTCTTGAATTTGAAGGATAAATATGACAAGGTTATTACCTTGGCGTTTAACAATGACAAGACA TTTCAGAATGCCTTGAATTCTTCTTTTGAATATTTCATCAATTTGAATGCTCGGTCACCAGAGTTCATTTCTTTGTTTGTGGATGACAAGCTTCGCAGAG GGTTGAAAGGGGTTGGTGAAGAGGATGTGGAGGTTGTACTAGACAAAGTCATGATGCTTTTCCGGTACCTACAAGAGAAGGATGTGTTTGAGAAGTATTA CAAGCAGCACTTAGCAAAAAGGCTTCTTTCAGGGAAAACTATATCTGATGACGCAGAAAGAAGTTTGATTGTTAAGCTCAAAACAGAGTGTGGATATCAA TTCACTTCTAAGTTAGAGGGTATGTTTACTGACATGAAGACTTCCCATGACACGATGCAGGGTTTCTATGCATCTCTTGGTGCTGAGTTCGGGGATAACC CTACACTAGTTGTCCAGGTGCTTACAACGGGTTCATGGCCAACTCAATCTAGCCCTCAGTGTAATCTTCCATCCGACATCATAGGCGTATGTGATAGGTT CAAGTCATATTATCTTGGCACCCACAACGGTAGGAGATTATCCTGGCAAACAAGTATGGGGACAGCTGATTTAAAAGCAACATTTGGTAACGGCCAGAAG CATGAGCTGAATGTATCCACATACCAGATGTGTGTACTCATGCTTTTCAACAACGCTGATCGATTGACTTGTAAGGAGATAGAACAGGCCACATCTATAC CAATTTCAGAGTTGAAGAGGTGCCTTCAATCTCTCGCCTGTGTCAAAGGAAAGAATGTTCTTCGGAAAGAGCCTATGAGTAAGGACATATCTGACGATGA TGCATTTTTCTTCAATGACAAATTCACAAGCAAGTTCTTCAAGGTAAAGATAGGAACTGTTGTTGCACAGAGGGAGTCTGAACCGGAAAATATAGAAACT CGGCAGAGAGTGGAAGAAGACAGAAAGCCACAGATTGAGGCAGCAATTGTGAGGATAATGAAATCTAGGAAGACTCTAGAACATAATAATGTCATTGCTG AGGTCACAAAGCAGCTGCAGCCAAGATTTTTGGCTAACCCTGTTGTTATTAAAAAACGGATCGAATCCCTTATTGAACGTGAGTTTCTGGAGAGGGATAA AGTGGACAGAAAACTGTATCGCTATCTTGCTTGAACATGGTATGTTTTTTTTGAACTTGCACTCCAAAATCATTTTGGCTTTGGACCTATGTGATTCAAA TTCTGTTAGAAGTTGTAATGCTCATTACAAAATTGTAGCAAGTAGTGCATCTCCCCTTTTGCATATTCAACAAAAATACAAGCCTGCTAGAGTCACTTCT TTAAGGCTGCATAACACAATATCTTTTTAGCTTCTTACATTTGAAAACATTATACTTAATCATTTTGGATGTGGTTAGACTTGCTTTATTTATTCTAATT TGGTAAATGTAAATGGAAAGAAATTATAGTTTTGTAGGTTATTGAACGGTTTGATTACAAAATTCATATTTAGGGGATGAGAATTTTGTTTCATAGCAAA ATGATTTGCAAAATACCCCAGATGAAAATAATCTATTGTGCTGCCTTGCCAGCATAGTAATATATTTTATTGTAATGCTATTGCTATATAACTTGCTAAT TAATTCTATATCCTCATTGATATTATCTTCAAA
• Tissue: pods
• Gene name: LI_gene_132263;
• Additional information: details;

Expression of Ll_transcript_468815

FPKM

• PAB: 4.1
• PNAB: 7.8
• PS1: 8.7
• PS2: 10.1
• PS3: 11
• PW1: 8
• PW2: 7.6
• PW3: 7.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_468815

• Blastp: Cullin-3A from Arabidopsis with 77.63% of identity
• Blastx: Cullin-3A from Arabidopsis with 77.63% of identity
• Eggnog: cullin 1(COG5647)
• Kegg: Link to kegg annotations (AT1G26830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428399.1)
• Pfam: Cullin family (PF00888.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;