Ll_transcript_468817

• Id Trinity: TRINITY_DN40599_c0_g1_i1
• Name Transcript: Ll_transcript_468817
• Sequence: TCTTAATCCAAAATATGCAGTGAAAGTGTGAAAAAATGCAAGTCTCCATCGCAATGCGAGTTCCCACTTGGTTCTCACGACGAAAACTCCTTGACGATAA GCTTTGTGACCTTCACAAATGCACTAACCTTCACCACATTAACCAAATCCACGCTCAAATTCTCAAATCCAATCTCCACCACGACCCTTACATTGTTCCT AAACTCATCACCGCCCTCTCCCTCCACCGCCACCTCATCTCCGCCGTTAACGTCTTCAACCAATTTCCAGACCCCAACGTCCACGTCTACAACTCCCTCA TTCGTGCTCACTCTTATAACAACTCTCACGCTTCTCTTTCCTTCAACGCTTTCTTCGATATGCAGTGTTGTGGGGTATACCCAGATAATTTTACTTACTC TTTTTTGTTGAAGGCTTGTAATTCTTTGTCTTTGGTTCAAATGGTGCATGCCCATGTTGAAAAGCTTGGGTTTTACGGTGATATTTTTGTGCCCAATGCG TTGATTGATTCGTATTGTAAGTTTGGGTGTGTTGGAATTCGTGCGGGGATGAAGCTGTTTATGGTGATGGAGGAGCGTGATGTTGTTAGTTGGAATAGTA TGATTGGTGGGTTGGTGAAAAATGGCGAGTTGGATGATGCGTGCAAGCTGTTTGATGAAATGCCGAAGAGAGATATGGTTAGTTGGAACACGATGTTGGA TGGGTATGCTAAAGCGGGGGAGATGAATAAGGCGTTTGGGCTTTTTGAGAGAATGCCGGAGAGGAATGTTATCTCTTGGTCGACGATGGTTTGGGGTTAT AGTAAGGCTGGTGATATGGCTATGGCGAGGATGTTGTTTGATAAGTGTCCTATGAAGAATTTGATCATTTGGACGACTATAATATCTGGGTATGCGGAGA AGGGAATTGTGAAGGAGGCGACAGTGTTGTATGATAAAATGGAGGAAGTTGGGTTAAAGCCTGATGATGGGTTTTTGATAAGTATTTTGGCTGCATGTGC TGAATCTGGAATGCTCGGGTTAGGGAAGAGAATTCATGCTTCTATTCGGAGGTGTAGGTTTAGATGCAGCACTAAGGTGTTGAATGCATTCATTGATATG TATGCAAAGTGTGGCTGTTTGGATGCTGCCTTTGGTGTTTTCAGTGGAATGTCTAGGAGAGATTTGGTGTCTTGGAATTCAATGATCCATGGATTAGGAA TACATGGACATGGTGAGAAAGCACTTAAGCTTTTCTCTAGGATGGTACATGAAGGTTTTGAGCCAGATAAATATACATTCATTGGCCTTTTATGTGCTTG CACCCATGCAGGCCTTATAAATGAAGGGCGTAATTATTTCTATGCAATGGAGAAAGTATATGGTATTGTTCCTCAAGTTGAGCACTATGGTTGCATGATT GACCTTCTCGGCCGTGGGGGGCTTCTAGAGGAAGCTTTTGGGCTTCTTCGTAACATGCCTATGGAACCAAATGTCGTTGTATTGGGTACACTTCTAGGGG CTTGTCGGATGCATAATGATGTAGATCTCGCAAAAGCTGTGTGTGAACACTTGTTTAAGCTAGCTCCATCAGATCCTGGAAATTTCTCCCTCATGTCAAA TATCTATGCTCAAGCAGGCGATTGGGTAAATGTTGCCAATATAAGGAAGCAAATGAAGAGTACAGGCGGCCAAAAGCCTTCCGGGGCTAGTTCCATTGAG GTAGAAGAAGAAGTGCACGAATTTACAGTATTCGACCAATCACACCCGAAATCAAATGATATATATGAGATGATTGACAGATTGGTTCAGGACCTTAGGC AGGTTGGATATGTTCCGAAGGCATACATATAGAGATGGATGAGTACGGTTTGGTTGCATCTGAATGGGCAGCACAAGTGATGCTTGTAGTTCAAGAAATG AATATGAGATGGAAAATATCTATATATCTTGCGGAAACTGCCTCTCCGCTTGCAGGTGTAAGGTTACGCATATGTGCCTTTCCGAAATCCCACTAAGTGG GAGTCTCGTGCAATGGGCCGCCCTTGATTTATATATCTTGCTGGTATACTAAAAGTAAAGAAAATGTTGTATTCATTGATGCTGCCCTTTATCGTGGCCG CCCGAATTATGGGAGCATTTTACAATCCTTCTAATGCTGGCTGGGGAACATTTTGTAAAAAGAAAATGACCAGATATGCTTCCTGTCTATTTTTTGTGCT AAAAAGAAGCTCTGCTTCACACATATATATACTGTGGCAATCCCACTCTATACTGCATTTATGCATTCATTTCTCTTGCTAGTTGGAAGATATGAAGATA ACTAATTTGTTTAAAG
• Tissue: pods
• Gene name: LI_gene_132328;
• Additional information: details;

Expression of Ll_transcript_468817

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.9
• PS2: 0.6
• PS3: 0.8
• PW1: 1.1
• PW2: 0.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_468817

• Blastp: Pentatricopeptide repeat-containing protein At3g29230 from Arabidopsis with 61.02% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g29230 from Arabidopsis with 61.02% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G29230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459123.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;