| Id Trinity | TRINITY_DN40638_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_308637 |
| Sequence | CCGCCACAAACATGTAACGACTTTTTCTCTCTTACTCTCTCTTTCTTCTTCTCCTTCTTCTCATTCTCTCATTTCTCAAATCTTCATTCACAACTCAATT CTCAACAAATTTCTCAAACGATGTCGTTCTCTGATTCCGAAACTTCCACTGAGTACAAGCCCTTCAAGCAAATAAGCCGCGATCGATTATTGTATGAAAT GCTTAGATCGGCAAGGTCCGGGGATTCGAAAGCATGGAAGGTACTTATAATGGATAAAGTCACTGTCAAAGTTATGTCACATTCATGTAAAATGGCAGAC ATCACTGACCAAGAAGTTTCCTTGGTGGAAGACCTTTTCCGGCGAAGGCAACCATTACCATCTATGGATGCTGTTTATTTCATCCAGCCTTCGAAAGAGA ATGTGGTCATGTTCTTGTCTGATATGTCAGGAAGGGAGCCCCTATACAAGAAAGCCTACGTATTTTTTAGTTCACCAATTCCAAAGGAACTTGTAAACCA TATCAAGAGTGATACAAGTGTCTTACCTCGCATAGGTGCATTGAGAGAGATGAATTTGGAATACTTCCCAATAGATAGCCAGGCGTTTATCACTGATCAA GAAACAGCACTGGAAGAACTTTATGGAAATATAGAGAATACTCGCAGATTTAATACCTCGATGAATAATATGGCAATTCGAATAGCTACAGTTTTTGCTT CATTGAAGGAATTACCGAATGTGTGGTATCGTGCTGCAAAGGATAGTGACGAGTCTAAACCATTTTCAGCCCGTGAATTAGTTCCTACCAAGCTTGCTAA TGCTGTTTGGGACATGGTTTCTAAATATAAGTCTACTATTCCCAACTTTCCACAAAACGAAACATGTGACCTCCTCATTGTTGATAGATCAATGGATCAG ATTGCTCCAGTAATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGAATATGAACGGAAACAAATATATGCATGAGGTTCCCAGCAAAACAG GGGGTCAGCCTGAGCAAAAGGAGGTCCTTCTAGAAGACCATGATCCAGTCTGGCTTGAACTTCGCCATACACATATAGCAGATGCTAGTGAAAGACTGCA CGAAAAGTTTACCAACTTTGTGTCAAAGAACAAAGCTGCACAAATCCAACAAAGTGGAAGAGATGGTAGTGAGTTATCTACACGTGATTTGCAAAAAATG GTTCAGGCATTGCCCCAATATACTGAGCAAGTGGAGAAGATTTCACTCCATGTAGAGATAGCTGGAAAGATAAACAAAATCATCAGAGAAACTGAACTTA GAGAGCTTGGACAGTTGGAACAAGATCTTGTTTTTGGAGATGCTGCAGCTAAGGACGTTATTAACTTTTTAAGAACAAAGCAGAATACAAATCCTGAATA TAAGTTGCGGTTGTTGATGATTTATGCATCAGTCTATCCGGAAAAGTTTGAGGGTGATAAAGCTACAAAGCTAATGCAGTTGGCAAAACTATCACCTGAT GACATGAAAGTTATCAGTAATATGCAATTGCTGGCGGGATCATCAAACAAGAAGACACCTGCTGCTGGTAGTTTCTCACTCAAGTTCAGTAACCAGAAGA CAAAGCAAGCAGCACGCAAAGATCGTACTGAAGAAGAAGAAGAAACGTGGCAACTATTTCGATTTTATCCCATGATAGAGGAGCTCATTGAAAATCTCAA TAAGGGTGAATTACCGAAGAGCGACTACTCATGTAAAAACGAGCCAAGTCCTGTTGTCACAGAGGGCTCTGTTAGAATGATTGAGAGTAATTCTCTCATT AAAGAATGATTGAGATCGATCACTTCCTTTGTTAAGGTGCTATTCTTACATAGGATTTATTTCTTGTTGTCATTGTGTGAGAAAGAATATGAGATATACT GATGAAGGAGAAAGGGATTGCATAGGAAATCTTTTGTTTGCTTAAACACTGCAACACCAGCTTCAAATCTTATTTGCTTTAGTAACTTATTTGGTCAAAA TATAAATGGCCTTACATCTGGCAGGAGCTCATTGAAAATCTCAATAAGGGTGAATTACCGAAGAGCGACTACTCATGTAAAAACGAGCCAAGTCCTGTTG TCACAGAGGGCTCTGTTAGAAGCAAGCAACGCACCCAGACGGCTCCAACTACCGCTCCTCATTCGATGAGATCTAGGAGAACAGCAAATTGGGCGCGGCC TCGTTCTTCTGATGATGGATACTCAAGTGACTCCACGTTGAAGAATGTGACTGCTGATTTCAAGAAGATGGGAAAGCGAATCTTTGTGTTTATTATTGGT GGAGCAACTAGATCCGAGCTACGTGTTTGCCACAAAATGACAACAAAACTAAAGAGGGAAGTAATCCTAGGTTCTTCTTCTATTGATGATCCTCCACAAT TTCTTACGAAGTTGAAGTTATTGTGCGAACCTCATATGGCGATGGACGGTCTGAAGATGTTTTGAAGACGGCGGCTAGCTGCAAGCAGGTTGGCCATATC TTGATGTATCTATTTATATTCATGGCTTAGACATTAGAAAGTTTATGCCATCTTCAGAAGGGGTGAATGACCCTTCTTGTTTTACACTAATTTTGTCATT TGGATTCTCAGCAATACTTTAATTACTTGTGTCATGCATTTTTGTTACAAAACTCCACAACACATTCGTATATGAAATACATGTGGTACGGATATTAAGA AGTATGCATATTTCTCATGTGCATTGTATGTGAAAGAAGGATACTTTGATGAGTGAAAGAGTATAAAGTATCTAATTTTTATTTTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_132372; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_308637
| Blastp | Protein transport Sec1a from Arabidopsis with 76.22% of identity |
|---|---|
| Blastx | Protein transport Sec1a from Arabidopsis with 76.22% of identity |
| Eggnog | Vacuolar Protein(COG5158) |
| Kegg | Link to kegg annotations (AT1G02010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433635.1) |
| Pfam | Sec1 family (PF00995.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |