Ll_transcript_308638

• Id Trinity: TRINITY_DN40638_c0_g1_i2
• Name Transcript: Ll_transcript_308638
• Sequence: CCGCCACAAACATGTAACGACTTTTTCTCTCTTACTCTCTCTTTCTTCTTCTCCTTCTTCTCATTCTCTCATTTCTCAAATCTTCATTCACAACTCAATT CTCAACAAATTTCTCAAACGATGTCGTTCTCTGATTCCGAAACTTCCACTGAGTACAAGCCCTTCAAGCAAATAAGCCGCGATCGATTATTGTATGAAAT GCTTAGATCGGCAAGGTCCGGGGATTCGAAAGCATGGAAGGTACTTATAATGGATAAAGTCACTGTCAAAGTTATGTCACATTCATGTAAAATGGCAGAC ATCACTGACCAAGAAGTTTCCTTGGTGGAAGACCTTTTCCGGCGAAGGCAACCATTACCATCTATGGATGCTGTTTATTTCATCCAGCCTTCGAAAGAGA ATGTGGTCATGTTCTTGTCTGATATGTCAGGAAGGGAGCCCCTATACAAGAAAGCCTACGTATTTTTTAGTTCACCAATTCCAAAGGAACTTGTAAACCA TATCAAGAGTGATACAAGTGTCTTACCTCGCATAGGTGCATTGAGAGAGATGAATTTGGAATACTTCCCAATAGATAGCCAGGCGTTTATCACTGATCAA GAAACAGCACTGGAAGAACTTTATGGAAATATAGAGAATACTCGCAGATTTAATACCTCGATGAATAATATGGCAATTCGAATAGCTACAGTTTTTGCTT CATTGAAGGAATTACCGAATGTGTGGTATCGTGCTGCAAAGGATAGTGACGAGTCTAAACCATTTTCAGCCCGTGAATTAGTTCCTACCAAGCTTGCTAA TGCTGTTTGGGACATGGTTTCTAAATATAAGTCTACTATTCCCAACTTTCCACAAAACGAAACATGTGACCTCCTCATTGTTGATAGATCAATGGATCAG ATTGCTCCAGTAATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGAATATGAACGGAAACAAATATATGCATGAGGTTCCCAGCAAAACAG GGGGTCAGCCTGAGCAAAAGGAGGTCCTTCTAGAAGACCATGATCCAGTCTGGCTTGAACTTCGCCATACACATATAGCAGATGCTAGTGAAAGACTGCA CGAAAAGTTTACCAACTTTGTGTCAAAGAACAAAGCTGCACAAATCCAACAAAGTGGAAGAGATGGTAGTGAGTTATCTACACGTGATTTGCAAAAAATG GTTCAGGCATTGCCCCAATATACTGAGCAAGTGGAGAAGATTTCACTCCATGTAGAGATAGCTGGAAAGATAAACAAAATCATCAGAGAAACTGAACTTA GAGAGCTTGGACAGTTGGAACAAGATCTTGTTTTTGGAGATGCTGCAGCTAAGGACGTTATTAACTTTTTAAGAACAAAGCAGAATACAAATCCTGAATA TAAGTTGCGGTTGTTGATGATTTATGCATCAGTCTATCCGGAAAAGTTTGAGGGTGATAAAGCTACAAAGCTAATGCAGTTGGCAAAACTATCACCTGAT GACATGAAAGTTATCAGTAATATGCAATTGCTGGCGGGATCATCAAACAAGAAGACACCTGCTGCTGGTAGTTTCTCACTCAAGTTCAGTAACCAGAAGA CAAAGCAAGCAGCACGCAAAGATCGTACTGAAGAAGAAGAAGAAACGTGGCAACTATTTCGATTTTATCCCATGATAGAGGAGCTCATTGAAAATCTCAA TAAGGGTGAATTACCGAAGAGCGACTACTCATGTAAAAACGAGCCAAGTCCTGTTGTCACAGAGGGCTCTGTTAGAAGCAAGCAACGCACCCAGACGGCT CCAACTACCGCTCCTCATTCGATGAGATCTAGGAGAACAGCAAATTGGGCGCGGCCTCGTTCTTCTGATGATGGATACTCAAGTGACTCCACGTTGAAGA ATGTGACTGCTGATTTCAAGAAGATGGGAAAGCGAATCTTTGTGTTTATTATTGGTGGAGCAACTAGATCCGAGCTACGTGTTTGCCACAAAATGACAAC AAAACTAAAGAGGGAAGTAATCCTAGGTTCTTCTTCTATTGATGATCCTCCACAATTTCTTACGAAGTTGAAGTTATTGTGCGAACCTCATATGGCGATG GACGGTCTGAAGATGTTTTGAAGACGGCGGCTAGCTGCAAGCAGGTTGGCCATATCTTGATGTATCTATTTATATTCATGGCTTAGACATTAGAAAGTTT ATGCCATCTTCAGAAGGGGTGAATGACCCTTCTTGTTTTACACTAATTTTGTCATTTGGATTCTCAGCAATACTTTAATTACTTGTGTCATGCATTTTTG TTACAAAACTCCACAACACATTCGTATATGAAATACATGTGGTACGGATATTAAGAAGTATGCATATTTCTCATGTGCATTGTATGTGAAAGAAGGATAC TTTGATGAGTGAAAGAGTATAAAGTATCTAATTTTTATTTTAAA
• Tissue: pods
• Gene name: LI_gene_132372;
• Additional information: details;

Expression of Ll_transcript_308638

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.1
• PS3: 0.3
• PW1: 0.3
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_308638

• Blastp: Protein transport Sec1a from Arabidopsis with 73.72% of identity
• Blastx: Protein transport Sec1a from Arabidopsis with 73.93% of identity
• Eggnog: Vacuolar Protein(COG5158)
• Kegg: Link to kegg annotations (AT1G02010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433635.1)
• Pfam: Sec1 family (PF00995.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;