Ll_transcript_452048

• Id Trinity: TRINITY_DN40749_c0_g1_i1
• Name Transcript: Ll_transcript_452048
• Sequence: CTTGAATGCTATGCTTATATTGTCTACTTGCTTGATGGTGTTTAATCTTTTTCTCTATTTTCTCTTAAAATGCTTATATATAAGAACATTGTAAGAATAC TAATGAGTACTTGGAAAACATTACATCAAAGGATATTGCCATAACTTATAACAATCCATTTCCTCTTCATCAATCATTACCCTTTCTTAAGATAGCACTA TGGGAACCAAGTCCCTTTGCTATGTATTCTTATTATATGCTTTCCTTGTTCAATTTAATTTGCACAACTGTGCAATTGTTTCTCAAGATATAGCAAGATC AGAAAGTGAAGCACTAGAGCAAGCAGGATCCAAGAGAGAAACATTGGAAATCATCATAGGGGGTGGCAGTTATACTCCTGCTCCATCACCTCAATGCCCT CCACCCCCTCCTCCGCCATGTCCACCACCACCGCAACCGCTTAGCCGGTTGGACAAAGCCCGTCTCGTGCTTCTAAATTTCACAAAATTCATTGATGACC CAAAAGGGTACACTAAAAACTGGAACCAGAACACCATAAACACTTGCAAATTCAATGGTATAAGATGTGCCCCATATCCAAACACAACTGAGCAAGCAGT TGCTGGAATAGACCTTAACCAAGCTGGTATATCATGCCTTAACAAAACCCCTTTATCTCTTTATGGTATCTTAGATAGGATACCTGAATTGACATTTTTT CATGTGAACTCTAACAACTTCTCTGGTGGTATCCCAAACCAAATAACCAAGTTCCCTTTTTTCTTCGAGTTAGATGTTAGTAACAACAAACTGGTTGGTG AGTTTCCAAAAGAAGTGCTTCAGGCTATGCAACTAGTGTTCTTAGATCTAAGGTTCAACTATCTCTATGGCTCACTTCCACCACAATTGTTTCAGTTGCC ACTAGATTTTATCTTCATCAACAACAATAAGTTCAGTCAATGTCTCCCTGATAACTTTGGCTCCACCCCTGCAAGGTACTCAACCATGGATATACCTTAA AATTGGCTATGTAGTGGTGAATCATAAATTTTTTGATATTTTGAGTAGTGAATATTAGGAGATAAATCATAAATATATATATACTTTTTAAGCAATGGCT CGACCATTATAGAAATTTTAACCTCATCACTTTATATCTTAAGGAACCATTTTAAGACCGGAAATAAACCATTTACTATACATAGAGTCTGATTTTTAAT TGATTTTTGCCCTGCAGGTACCTCACATTTGCTAACAACCAATTCTCGGGTCCAATCCCAAGGAGTATTGGCAATGCTTCACAAACCCTCACTGAAGTGC TTTTCTTAGGGAACAAATTTGAAGGGTGTTTGCCATATGAAATTGGCTACCTCAAAAAGGCTACAGTCTTTGATGTGAGCAAAAACAAATTAACTGGTCC AATTCCACTCTCTTTTGCTTGCTTGGACAAAATCCAGATCCTTAATTTGGCACACAACAAGTTTTATGGTTCAGTTCCAGAGACCGTGTGCCAGTTACCG GGCCTTCGCAACAATGGTAACTTGTCTTTGTCAGACAACTACTTCACTGAGGTTGGACCAGAATGTAGGAAGCTAATAAAGTCCAATGTTTTGGACGTGA ACAATAACTGCATTCCTGGGTTTCCAAATCAGAGATCATATAATGAGTGCTATGAGTTTTCATGCAAAGTGAAACCTTGCCCCAATGAGAAGTATTTGAG TTACATCCCTTGTAAGGGACCCTGGGGGCAGAGCACTACCCTTGTTTCTGAGACAAGTGCTTCACCACCTAATCCGGTAGCTTATAAGTCTCTTAAACCA CATCGGTTGAGACTGTAATCAAGTCATAATCGATGATTATGTTTGTGTGTATTTATATATGTTTATATCTTTCATAATTAGTTATCTGGTAATTTTTGTT TTGTATTAAGGAATAAGCGGTGTAGTCCAATTTAGCATCTTTGATTTTATGGCACTTTGATGCCAGTCACATGTACTTTTTATAAGTGATTAAATAAATT TGTCATAGTATGTTAAGGATGATGATGGAGCTATACGCTGTTTTGGTCTTAGTAGATGTGAATTCCAAATTCTACAATGAGAAAACTCTATCTTTAGTCT CTCAGGGA
• Tissue: pods
• Gene name: LI_gene_132513;
• Additional information: details;

Expression of Ll_transcript_452048

FPKM

• PAB: 1.7
• PNAB: 0.7
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0.6
• PW2: 0.6
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_452048

• Blastp: Leucine-rich repeat extensin-like protein 1 from Arabidopsis with 41.01% of identity
• Blastx: Uncharacterized protein At4g06744 from Arabidopsis with 57.99% of identity
• Eggnog: Leucine-rich repeat(ENOG411157W)
• Kegg: Link to kegg annotations (AT1G12040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445810.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;