Ll_transcript_452052

• Id Trinity: TRINITY_DN40749_c0_g1_i2
• Name Transcript: Ll_transcript_452052
• Sequence: CTTGAATGCTATGCTTATATTGTCTACTTGCTTGATGGTGTTTAATCTTTTTCTCTATTTTCTCTTAAAATGCTTATATATAAGAACATTGTAAGAATAC TAATGAGTACTTGGAAAACATTACATCAAAGGATATTGCCATAACTTATAACAATCCATTTCCTCTTCATCAATCATTACCCTTTCTTAAGATAGCACTA TGGGAACCAAGTCCCTTTGCTATGTATTCTTATTATATGCTTTCCTTGTTCAATTTAATTTGCACAACTGTGCAATTGTTTCTCAAGATATAGCAAGATC AGAAAGTGAAGCACTAGAGCAAGCAGGATCCAAGAGAGAAACATTGGAAATCATCATAGGGGGTGGCAGTTATACTCCTGCTCCATCACCTCAATGCCCT CCACCCCCTCCTCCGCCATGTCCACCACCACCGCAACCGCTTAGCCGGTTGGACAAAGCCCGTCTCGTGCTTCTAAATTTCACAAAATTCATTGATGACC CAAAAGGGTACACTAAAAACTGGAACCAGAACACCATAAACACTTGCAAATTCAATGGTATAAGATGTGCCCCATATCCAAACACAACTGAGCAAGCAGT TGCTGGAATAGACCTTAACCAAGCTGGTATATCATGCCTTAACAAAACCCCTTTATCTCTTTATGGTATCTTAGATAGGATACCTGAATTGACATTTTTT CATGTGAACTCTAACAACTTCTCTGGTGGTATCCCAAACCAAATAACCAAGTTCCCTTTTTTCTTCGAGTTAGATGTTAGTAACAACAAACTGGTTGGTG AGTTTCCAAAAGAAGTGCTTCAGGCTATGCAACTAGTGTTCTTAGATCTAAGGTTCAACTATCTCTATGGCTCACTTCCACCACAATTGTTTCAGTTGCC ACTAGATTTTATCTTCATCAACAACAATAAGTTCAGTCAATGTCTCCCTGATAACTTTGGCTCCACCCCTGCAAGGTACCTCACATTTGCTAACAACCAA TTCTCGGGTCCAATCCCAAGGAGTATTGGCAATGCTTCACAAACCCTCACTGAAGTGCTTTTCTTAGGGAACAAATTTGAAGGGTGTTTGCCATATGAAA TTGGCTACCTCAAAAAGGCTACAGTCTTTGATGTGAGCAAAAACAAATTAACTGGTCCAATTCCACTCTCTTTTGCTTGCTTGGACAAAATCCAGATCCT TAATTTGGCACACAACAAGTTTTATGGTTCAGTTCCAGAGACCGTGTGCCAGTTACCGGGCCTTCGCAACAATGGTAACTTGTCTTTGTCAGACAACTAC TTCACTGAGGTTGGACCAGAATGTAGGAAGCTAATAAAGTCCAATGTTTTGGACGTGAACAATAACTGCATTCCTGGGTTTCCAAATCAGAGATCATATA ATGAGTGCTATGAGTTTTCATGCAAAGTGAAACCTTGCCCCAATGAGAAGTATTTGAGTTACATCCCTTGTAAGGGACCCTGGGGGCAGAGCACTACCCT TGTTTCTGAGACAAGTGCTTCACCACCTAATCCGGTAGCTTATAAGTCTCTTAAACCACATCGGTTGAGACTGTAATCAAGTCATAATCGATGATTATGT TTGTGTGTATTTATATATGTTTATATCTTTCATAATTAGTTATCTGGTAATTTTTGTTTTGTATTAAGGAATAAGCGGTGTAGTCCAATTTAGCATCTTT GATTTTATGGCACTTTGATGCCAGTCACATGTACTTTTTATAAGTGATTAAATAAATTTGTCATAGTATGTTAAGGATGATGATGGAGCTATACGCTGTT TTGGTCTTAGTAGATGTGAATTCCAAATTCTACAATGAGAAAACTCTATCTTTAGTCTCTCAGGGA
• Tissue: pods
• Gene name: LI_gene_132513;
• Additional information: details;

Expression of Ll_transcript_452052

FPKM

• PAB: 47.1
• PNAB: 14.2
• PS1: 4.3
• PS2: 0.5
• PS3: 2.1
• PW1: 36.5
• PW2: 64
• PW3: 22.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_452052

• Blastp: Uncharacterized protein At4g06744 from Arabidopsis with 48% of identity
• Blastx: Uncharacterized protein At4g06744 from Arabidopsis with 47.71% of identity
• Eggnog: NA(ENOG410YFAF)
• Kegg: Link to kegg annotations (AT4G06744)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445810.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;