Ll_transcript_361606

• Id Trinity: TRINITY_DN40851_c0_g1_i1
• Name Transcript: Ll_transcript_361606
• Sequence: CTGAAATCATCATATCTGAAATTCTCAATTAACAGTGATATCCCAATTTTGATTCTCAACTGTGAAAAATGCAGAGACAAATTCTCCACTACTCCAAAAC CCTAAGAACCTTCACTTCACACCATATCATAACACCATTACCAACCCATCAATTTCAAACCCAAAAGCTTCAACTTTTCCATTCCCCAAATCACAACACT TCAATTTCCCCAATTGGGTCACCAACCAGAGTTCAAAAACTCATTGCTTCACAACAAGACCCTCTCCTTGCAAAACAAATCTTTGACTATGCTTCCACTC TTCCCAATTTCCGCCACACTTATTCCACTTACCTTATCCTTGTTCTCAAATTGGGTCGCTCTAAACACTTCACTCTCCTTGATCAAATCATAATTCGCTT GAAAAATGACCCTTCTTACAAAATCACACATACCCTTTTCACTTACTTGATCAGAGTCTATGGTGAAGCTGATTTACCTGAAAAAGCACTCAAAATGTTT TACACCATGATGCAATTCAATCTCAAACCTTTAACCAAACACCTTAACTGCATTCTTGAGATTCTTGTTTCGCATAGGAACTATGTTAGGCCGGCTTTTG ATTTGTTTAGGGATGCTCATAAACATGGGGTTATAGCGAATACTAGGTCTTATAATGTTTTGATGAGGGCTTTTTGTTTGAATGGGGATGTTAGTATTGC ATATATGCTGTTCAATAAAATGTTTAAGAGAGATGTTCTTCCGGATATCGAGTCTTACCGGATTTTGATGCAGGCTTTGTGTAGGAGGAATCAAGTGAAT GGTGCTGTTGATTTGTTGGAAGATATGTTGAACAAAGGGTTTGTTCCTGATTCTTTGACTTATACCACTTTGTTGAATAGTTTGTGTAGGAAGAAGAAGC TTAGAGAGGCTTACAAGCTTCTTTGTAGGATGAAGGTTAAAGGGTGTAATCCTGATATACTTCATTACAATACAGTTATTTTGGGGTTCTGTAGAGAAGG GCGAGCACACGATGCTTGTAAAGTTATCGATGATATGCACGTGAATGGTTGCTTGCCTAATCTCGTGTCATATCGTACTTTGGTTAGTGGTTTGTGTCAC ATGGGTATGTTTGATGAGGCGAAAACATATATGGAGCAAATGCTGGGCAAAGGTTTTTCTCCACATTTTGCTGTTATCAATGCGTTAGTGAAGGGTTTCT GCAATGTTGGTAGGACTGAGGAAGCTTGTGAAGTTCTCACAAAGTCACTAGAGCATGGGGAAGCTCCTCATACGGATACTTGGATGAACGTAATACCTAT AATATGTGAAGACGAGGGTCAGAAAATCAGTGAGGCTATTGATGAAATTCGTAAGATTGAAATAAAAGGTCATACTAGAATAGTTGATGCTGGCATTGGT TTGGAGAACTACTTGATTAGGAAGATACGAGCCAAGTCGAGAGCATTTTAAATATTGTGTCTTACAATCTATAAGCATACCTGCAGCATGTAGTAATACT CAACTATGCCTCTTATGCATTCTTATTAGTTATTTTCCAGTGCCCTGCATTGTTTTGCTTCCTATGTTTTAACTATTTGTTTGTTTAAGAATCTGAGACA CATTCCTCTAGTACATATGGTTTGAATGCCGTTGTTACATATCAGTCAGAAACTCGGAATTGTCGTAGATGATAATTTATATTTTTTAAGAGCGATAAGA GATCGAGCCAGCTATATGGAGGATTGATATTGCTGATTGTGTTACAGAAATTACCAAGACAGCAATATAGAATGCAACATTGATGTTGCTGATTGTATTA TCAGGGATATAGTAAGGTCATTTCAGCATCAACCAGAGAACTGATAGAGACAATGGTACACTACATTACTCAAATGGCAAAATTCTAAACATATTTGGAA GGAGGGGTGATGGAGATGGTTGAGGTTATGTAAGCTTAGTTATGAAAATATGTGAAATTAACATATGCTGTTTGTATACTTCAGTTTTTTATTTATTTTA ATTTATAGTCTGTGATGTTAATAAGAAAAATGTTAAGAGTGTTCTTGTTCTGGTATTTGTGTTGACTTGATTGTGCTAGTGATTGTTTCAACAAAATGGA ATGTATATGATCTATACCTTCCATACCATTAGGATTTGTCGAGAAGTAAGTCCTACATTCCTACCTCATTTTCTCGGAATGGTTTATATACTCGTTAG
• Tissue: pods
• Gene name: LI_gene_132646;
• Additional information: details;

Expression of Ll_transcript_361606

FPKM

• PAB: 0.8
• PNAB: 5.3
• PS1: 3.8
• PS2: 7.1
• PS3: 3
• PW1: 6.6
• PW2: 4.7
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_361606

• Blastp: Pentatricopeptide repeat-containing protein At4g01400, mitochondrial from Arabidopsis with 59.09% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g01400, mitochondrial from Arabidopsis with 59.09% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT4G01400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438922.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;