| Id Trinity | TRINITY_DN41277_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_427703 |
| Sequence | GATGATCATGCCCAACCAAAGTGAGCCATGAAAGAAACATTAAATGTAGCATCAGTAGGGACCGTTGGGGAGGTTGGCATTTAAGGCTCACACCGCCTAA CTCAACCTTAGCTCACAATTACACTTACACGTGTGTTTCTATAATTGTATTGCGTTGTTTCTTCTTCTTGGTAATGTTATTCACCACTTAACCATTTTAC CATCAACTTCTAATCTACCACTTCCATGGGGAACGTTGATGCTGCTCTCAAAACCTCTTTGCTTTGGCTAGCAGCACTTATTTTGGTGGTTGGGTTATGC ACTCACTCCATGAAGAAGATGATGGTTACTTATGTTATGGGTGTTGTTGGGATTTCTGGGGTGCTCTTACCTGATTGGGATTACTTCAACCGTGATTTCT CTCGTTGGGGTTACCCTATTACTGCTGAAGAGAGGGCTTCTCATCTTGCCCAAGGATCTGGATTTCTAAGGTTTGCATATTCTCCACTGAGGGTGATTGC TTATTGCGTGATTTATGGATATGCTATGTACAAGTGGTGGAAGTATGTAACAAGTTCATAATTAATGAGTTTTGTGGCAGTAACTGCAGATGAATTCTTC TGAACCCTAATTTTAGCTGTATACGTTTAAATTTTGGTTATCTGATTTGTCTAATTCTGAGGGATTCATAAATACTAGTGATTGCTGGAGAGGTGCATCA TTGTACTTCAGAGTAGAGAAGGACATAACTTAAGCATTGTTTTTGGAATGGTGCATTGTTTTTGGAATGGTGCTATGTATATTTTCATGGATGAGCTGAA AATACAGCATCATTAATAGCTAAAACGACACCTGAGTTTTTTTTCCGTAAAAAAATGTTGTGTTCGCATTTTCATCTAATAATAAGTGTGGGAAAAAGAT GTAATCCCATAATAGCTTTATCAATGATACCTTATTTACGAACAGATATTCAAGTGACATGTTTGATTTACTTTAAGTAAGGTATCAGGTTTTAGTCCTG TGGATGAAAAAAATGTCTACTGGGAAAATTAGCTTCATACACTTGTGAATATTCTTGGCTCAACAAAAAAAAAATGATACCTTCTTAGGCACATGCCATT GTCAATGGGCTGAAAGACCATTCTATATCGTTTTTATCTTTGAACCTGTGAATTACACGGGATGAATGTAAGAGCAAAATCAATAGCAAAAGTTCTTTTT TTTTTTGGTTCAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_133126; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_427703
| Blastp | Signal peptidase complex-like protein DTM1 from Oryza sativa with 41.67% of identity |
|---|---|
| Blastx | Signal peptidase complex-like protein DTM1 from Oryza sativa with 41.67% of identity |
| Eggnog | Microsomal signal peptidase 12 kDa subunit (SPC12)(ENOG410YTII) |
| Kegg | Link to kegg annotations (4343951) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438530.1) |
| Pfam | Microsomal signal peptidase 12 kDa subunit (SPC12) (PF06645.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |