Id Trinity | TRINITY_DN41297_c0_g2_i1 |
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Name Transcript | Ll_transcript_427744 |
Sequence | CACACATTTCCTATACACTATTTCTTTTACTTGGTACTGTTTCATTCACACACATTCTGTTTAACATATGGAACCAGAGCCCTATTTTCCTACTCCTTCA CCCTCCTTAACCAGGTGGTGGTCGAAGGAGACGGTGGCGGTGGTGACCGGAGGGAACAAGGGCATTGGGTTTGAAGTGGTGAAGCAACTCGCAGAGTTAG GGCTGAATGTGGTGTTAACAGCTAGAGACACTAAAAAAGGTGAGGCTGCATTGGAGGCCCTAAGAGCACAAGGCCATGCTGCTAATGTTCACTTTCTATT GCTTGATGTATGTGACCCACTTTCTATCTCAACCTTTGCATCCTCCTTCCAAGCCTTATTTGGTGCCACCTTGGACATTCTTGTGAACAATGCGGGAGTA TCATTCAATGAACTGGATGAAAACTCTGTGGAGCATGCAGAAACAGTGATGAAGACCAACTTCTATGGTCCTAAGATGTTGATTGAGGCTCTCTACCCTC TCTTTCGTTGCTCTCCTTCAATCACTCGCATCCTCAACGTTAGCTCAAGGCTTGGCTCTATAAATAAGATGAGAAATGCTGATATGAAAGCAGTGCTGGA ACGTGAAAACTTATTGGAAGAAGAAATAGAGGAAATGGCGAACATGTTCCTTAGAGACGTGAAAAATAGGACATGGGAAAGTAAAGGGTGGCCATCATAT TGGACAGAGTATGCGGTTTCAAAGCTGGCTTTAAATGCATACTCTAGGGTTTTGGCAAAGAAATATTCATGTAATAATGGAAGTAGTAATTTGAGTGTGA ATTGCTTTTGCCCTGGCTTCACTCAAACCTCCATGACCAAGGGCAAAGGTGTTCACACCGCCGACCACGTCGCCTCCGTTGTCGCCTCCCTCGTCTTGCT TCCGCCACACCAGTTGCCCACCGGCAAGTTCTTTTCGATTGGGAGCAACAAGAAGAAGAACAGCACAACCCTAATTAACGTTTCTTCTAAACTATGATTA TTTTTATATTTGAGTTTAATTATGTTAAGGTATAGCTACCTCTTGAGCACTATATATTAATCAATAATAATTTTAAGAGTAAAT BLAST |
Tissue | pods |
Gene name | LI_gene_133148; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_427744
Blastp | (+)-neomenthol dehydrogenase from Arabidopsis with 40.48% of identity |
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Blastx | Salutaridine reductase from Papaver with 40.98% of identity |
Eggnog | Dehydrogenase reductase(COG1028) |
Kegg | Link to kegg annotations (AT3G61220) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434320.1) |
Pfam | short chain dehydrogenase (PF00106.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |