| Id Trinity | TRINITY_DN41330_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_417188 |
| Sequence | AACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATATAAACTCAACCTCCC ATCTATTCTTCACAAACATCCTCTCCAAGCTCCAACATTGTTTTCTCCCTTGTATTTTTTCAACCATGGCTACAATAACAATACTCACTTTACTCTTCTT TTTCTTCACTTTATCACTAGCTTTAGACATGTCCATCATTACCTACCCCCACAACCATAACCAACCCAACCCACGAAGCAACGATGAGGTTAGGACCATG TACGAGGAGTGGTTAGTTAAGCACCAAAAAGTGTATAATGGGTTGGGAGAGAAAGACAAGAGGTTTCAAGTTTTTAAGGATAACTTGGTGTTCATTGATG AGCATAATGCTCAAAACAACACATACAAACTTGGGTTGAACAAGTTTGCTGATTTAACTAATGAGGAATACCGTGCCATGTATTTGGGTACGAGGAATGA TCATAAGAGAAGGGTTATGAATGCTAAGAAAAGTGGTCACCGTTATGCATATGAAGCACGTGATAGGTTACCAGTGCATGTTGATTGGAGGTTGAAAGGT GCTGTTGCTCCAATCAAAGATCAGGGAGGTTGTGGAAGTTGTTGGGCATTCTCAACAGTAGGTGCAGTTGAAGGCATTAATAAAATAGTGACAGGGAAAT TGGTCTCTCTATCAGAACAAGAACTTATTGATTGTGACAGAATCTATGATGAAGGATGCAATGGTGGTCTCATGGACTATGCCTTTGAGTTCATCATTAG TAATGGTGGCCTAGACACAGAGCAAGACTATCCATACAAGGCCACTGATAGCATTTGTGATCCAACTAGGAAGAATTCTAAGGTTGCAACCATTGATGGG TATGAAGATGTTCCAGCATATAATGAAAAAGCTTTGAAGAAAGCAGTGGCTCATCAACCTGTGAGTGTTGCTATTGAAGCCTCTGGCAGGGCCTTCCAAC ACTATAACTCGGGTGTGTTTACTGGTAAATGTGGAACAGACTTGGACCATGGTGTGGTTGCAGTTGGCTATGGAACTGAAAATGGTGTCGACTATTGGCT CGTAAGAAACTCGTGGGGCGGTTCGTGGGGCGAGGAGGGCTACATCAAGATACAGCGCAACGTGAGAGGTACATCAGCTGGGAAATGTGGAATCACAATG CAGGCCTCATACCCAGTGAAGTATGGCAAGAAATCAATCCTCAATTCAGCTAATGAAAGCACTGGAATGTATATTAGCAGTACTTGAAAACCTTCATCAA TGGGAATGAATTTGAACTAGTGCTAGAGTTGTATGAAATTGTTGTTTGAATTTCTGTTAACTAAGGTATTATTCCTGTTGGGATGCAAATGTACATAGAT TTCTTCATATGAAAACTGCATCTAGTAATCAATTTGTACCAATTTGAATGTTAAATCTTAAATCAATTATTTCCATGTGTTAGTTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_133194; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417188
| Blastp | Probable cysteine protease RD21B from Arabidopsis with 64.8% of identity |
|---|---|
| Blastx | Probable cysteine protease RD21B from Arabidopsis with 66.67% of identity |
| Eggnog | cathepsin(COG4870) |
| Kegg | Link to kegg annotations (AT5G43060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446808.1) |
| Pfam | Cathepsin propeptide inhibitor domain (I29) (PF08246.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |