Ll_transcript_417189

• Id Trinity: TRINITY_DN41330_c0_g1_i2
• Name Transcript: Ll_transcript_417189
• Sequence: AACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATATAAACTCAACCTCCC ATCTATTCTTCACAAACATCCTCTCCAAGCTCCAACATTGTTTTCTCCCTTGTATTTTTTCAACCATGGCTACAATAACAATACTCACTTTACTCTTCTT TTTCTTCACTTTATCACTAGCTTTAGACATGTCCATCATTACCTACCCCCACAACCATAACCAACCCAACCCACGAAGCAACGATGAGGTTAGGACCATG TACGAGGAGTGGTTAGTTAAGCACCAAAAAGTGTATAATGGGTTGGGAGAGAAAGACAAGAGGTTTCAAGTTTTTAAGGATAACTTGGTGTTCATTGATG AGCATAATGCTCAAAACAACACATACAAACTTGGGTTGAACAAGTTTGCTGATTTAACTAATGAGGAATACCGTGCCATGTATTTGGGTACGAGGAATGA TCATAAGAGAAGGGTTATGAATGCTAAGAAAAGTGGTCACCGTTATGCATATGAAGCACGTGATAGGTTACCAGTGCATGTTGATTGGAGGTTGAAAGGT GCTGTTGCTCCAATCAAAGATCAGGGAGGTTGTGGAAGTTGTTGGGCATTCTCAACAGTAGGTGCAGTTGAAGGCATTAATAAAATAGTGACAGGGAAAT TGGTCTCTCTATCAGAACAAGAACTTATTGATTGTGACAGAATCTATGATGAAGGATGCAATGGTGGTCTCATGGACTATGCCTTTGAGTTCATCATTAG TAATGGTGGCCTAGACACAGAGCAAGACTATCCATACAAGGCCACTGATAGCATTTGTGATCCAACTAGGGTCAGTATATTAACTTTTCCAATTTTATAA CAATAAACAAACCTTTATCTCACTAGGATCGGCTACATGCATCGAACGAACGGCGCCATTATTCTCTATCATACAAAATCTATTTATGTATACTTTATAT TATATATAGCCGGTCCTAAACCTTGATAAAAGGTTAAATTTGCATTAGGCAGTCGACAACTAACGTTAAATTTTATGGAACATGGATCACCTTTCTCAAT CTTTGTAAAAAAGAAAATATGATTTGAGCTTATCTTAAAACATTTTATACTTTTCATTTAGAAAGACATTTTAAACTTAATAATTCATTTGTTACTAATG ATTACAGAAGAATTCTAAGGTTGCAACCATTGATGGGTATGAAGATGTTCCAGCATATAATGAAAAAGCTTTGAAGAAAGCAGTGGCTCATCAACCTGTG AGTGTTGCTATTGAAGCCTCTGGCAGGGCCTTCCAACACTATAACTCGGTAAGCAATATGCAATGAGTTCTATATTTTAGTGACTCAATTGAATCAATGA CTACTAGTCTCTTAGGTCATGAGTTCGAATTGTGGAATTCTCCCTCTTGGGAGAATAAAAGAATGCAGGGGTATTTAAGCCTAATTAATAGATGGCACGC TCAATAAATTTATGGTCTCGAGAGGTCGCATGTACTTAGCGATACGAAAACCACACATTTTATATAGAATAGTGCCAATAAGCTTGTGTTATTTGTTTCA GGGTGTGTTTACTGGTAAATGTGGAACAGACTTGGACCATGGTGTGGTTGCAGTTGGCTATGGAACTGAAAATGGTGTCGACTATTGGCTCGTAAGAAAC TCGTGGGGCGGTTCGTGGGGCGAGGAGGGCTACATCAAGATACAGCGCAACGTGAGAGGTACATCAGCTGGGAAATGTGGAATCACAATGCAGGCCTCAT ACCCAGTGAAGTATGGCAAGAAATCAATCCTCAATTCAGCTAATGAAAGCACTGGAATGTATATTAGCAGTACTTGAAAACCTTCATCAATGGGAATGAA TTTGAACTAGTGCTAGAGTTGTATGAAATTGTTGTTTGAATTTCTGTTAACTAAGGTATTATTCCTGTTGGGATGCAAATGTACATAGATTTCTTCATAT GAAAACTGCATCTAGTAATCAATTTGTACCAATTTGAATGTTAAATCTTAAATCAATTATTTCCATGTGTTAGTTAAAAA
• Tissue: pods
• Gene name: LI_gene_133194;
• Additional information: details;

Expression of Ll_transcript_417189

FPKM

• PAB: 1.8
• PNAB: 0.1
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_417189

• Blastp: Probable cysteine protease RD21B from Arabidopsis with 61.34% of identity
• Blastx: Probable cysteine protease RD21B from Arabidopsis with 64% of identity
• Eggnog: cathepsin(COG4870)
• Kegg: Link to kegg annotations (AT5G43060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446808.1)
• Pfam: Cathepsin propeptide inhibitor domain (I29) (PF08246.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;