| Id Trinity | TRINITY_DN41330_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_417191 |
| Sequence | AACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATATAAACTCAACCTCCC ATCTATTCTTCACAAACATCCTCTCCAAGCTCCAACATTGTTTTCTCCCTTGTATTTTTTCAACCATGGCTACAATAACAATACTCACTTTACTCTTCTT TTTCTTCACTTTATCACTAGCTTTAGACATGTCCATCATTACCTACCCCCACAACCATAACCAACCCAACCCACGAAGCAACGATGAGGTTAGGACCATG TACGAGGAGTGGTTAGTTAAGCACCAAAAAGTGTATAATGGGTTGGGAGAGAAAGACAAGAGGTTTCAAGTTTTTAAGGATAACTTGGTGTTCATTGATG AGCATAATGCTCAAAACAACACATACAAACTTGGGTTGAACAAGTTTGCTGATTTAACTAATGAGGAATACCGTGCCATGTATTTGGGTACGAGGAATGA TCATAAGAGAAGGGTTATGAATGCTAAGAAAAGTGGTCACCGTTATGCATATGAAGCACGTGATAGGTTACCAGTGCATGTTGATTGGAGGTTGAAAGGT GCTGTTGCTCCAATCAAAGATCAGGGAGGTTGTGGTAAGTTTTTTTCTTTACCTATAATTTTGGCTTTTCTTTTGTTAATCATAATATTAGATAAGGTTG GTTATTAGATAAAGACTTTTTTGAATTCAAGTGCAACAAGTTTAGGAATTGTTTGATTGGTGTATGGCCCACAGGATTCAATTATTTCGGTTAAAGGTGA ACTATTCAATTATTGGGAATATATTTTTTTAATAGTTTTTGTTTATTGTTAAGGAATTAATCTGTTTTGGGAACTAATTTTACTCTTAACATTTTGCTCA TCCTAGAGATTTAGTGGAAGTTATATTCTTAAAAATTATGTTAGAGTGATCTACCCAATAGATCAGTTCCTTGTCAATAATAAAAAAGATAATCTTCGTT ACAAAAAAAATTGTATCTTTTATAATATTACTACCATGATGAAACAAACAAATTTACACCTTTTGGATAGGATTTTTATTTATTTAATACTTATTCACCA AGAAAAAGACTATTTTATACTTGGAAAGCAATATCTACCAATAATACATAGAGAGGATAGATTCCTAAAGATAAAATGATAATAACTATAATTATTTAAG TATTTTTTATAGGAAAAGATGTATAAAGAACATGAGAATTTCTTGGAACTAGGTAGACTCAAAAACTCATATAACTTATACTTTTCTTCCACATGATGTT TTAAAGTTATTCCACTTAAACAATAATTTATTAAAATTTGGTAGATAATGGTAAGTTTGATTGAACTTTGAGTTGCAAAGTTGGACCTTTAGTTGGAAAT TTTGGACTGATGTATTATTCTACTTCAATTATTTATTTTATATCATTGCAGGAAGTTGTTGGGCATTCTCAACAGTAGGTGCAGTTGAAGGCATTAATAA AATAGTGACAGGGAAATTGGTCTCTCTATCAGAACAAGAACTTATTGATTGTGACAGAATCTATGATGAAGGATGCAATGGTGGTCTCATGGACTATGCC TTTGAGTTCATCATTAGTAATGGTGGCCTAGACACAGAGCAAGACTATCCATACAAGGCCACTGATAGCATTTGTGATCCAACTAGGAAGAATTCTAAGG TTGCAACCATTGATGGGTATGAAGATGTTCCAGCATATAATGAAAAAGCTTTGAAGAAAGCAGTGGCTCATCAACCTGTGAGTGTTGCTATTGAAGCCTC TGGCAGGGCCTTCCAACACTATAACTCGGGTGTGTTTACTGGTAAATGTGGAACAGACTTGGACCATGGTGTGGTTGCAGTTGGCTATGGAACTGAAAAT GGTGTCGACTATTGGCTCGTAAGAAACTCGTGGGGCGGTTCGTGGGGCGAGGAGGGCTACATCAAGATACAGCGCAACGTGAGAGGTACATCAGCTGGGA AATGTGGAATCACAATGCAGGCCTCATACCCAGTGAAGTATGGCAAGAAATCAATCCTCAATTCAGCTAATGAAAGCACTGGAATGTATATTAGCAGTAC TTGAAAACCTTCATCAATGGGAATGAATTTGAACTAGTGCTAGAGTTGTATGAAATTGTTGTTTGAATTTCTGTTAACTAAGGTATTATTCCTGTTGGGA TGCAAATGTACATAGATTTCTTCATATGAAAACTGCATCTAGTAATCAATTTGTACCAATTTGAATGTTAAATCTTAAATCAATTATTTCCATGTGTTAG TTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_133194; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417191
| Blastp | Cysteine proteinase COT44 from Brassica with 67.31% of identity |
|---|---|
| Blastx | Cysteine proteinase COT44 from Brassica with 70.79% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446808.1) |
| Pfam | Papain family cysteine protease (PF00112.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |