| Id Trinity | TRINITY_DN41348_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_417133 |
| Sequence | CTTTCATACTGGCCCATCAAACCAATACCCTCTTTCAATAACAAAACAGCGCTCACCTCTTCACTCTCTCATTGCTATACCATCCCACCACCGTTCGCGG CGGCTCCCACCGATTCCGGCAACCATATTCGAATTTGTGACACTTTCTCAGTTGAAGTCTAGCAAAATCATATAATGCCCCGAAGGCCAAGAATTCATCG CCAACGACTCAAAACTTTGCCAATTGGATTCTCCCCTTTTGCACGTGCTCTTGCTCGTATGGACTCTAGTTCAACAGCGAAGTATCAAGCACGGGACTCA GAATTCATTGAAAAGCCTAACCCTAGCTCTGCTGGTGATGGATTTGCAGAGCAGCCTTCGGATGACGAAGCAGAACAGTCTGCTTCATCATCAGATGAGC AGTTTGATGGAGTTGTTCAAGCAGATTTTTCCTTTTTCGACCCTAAACCTGCTGATTTTCATGGAGTGAAGACCTTGCTGCAAACTTACTTGGATGATAA AGAATGGGATTTGAGTGGCTTTGTAGATTTGATTTTGGAGCAGACCACAGTAGGAACTGTTGTTAAGATAGAGGATGATGAGGATGAAGGACTTTTTGCT TGTGTTAGTGCTCTTAATTTATGGAGATATAGGGAGCAAAAATGCATTATGGAAGTCAAGGACTACCTCCGTAAAGCGTGCAAGGAAAAGGGTGTTGCTG ACAAATTGAGATTGCTTTTGGAGGAACAAGCACGTAATGTTGGTCTGTTGGTGTCACAGCGTGTAGTGAACCTTCCTCCCCAGCTTTTACCACCTCTTTA TGATGGTCTCTTTGATGAAGTGTCATGGGCCACAGAAGATGAGCCAACAGAGGACCTCCGGAAGTCCTTCCAGTTCAAGCATTATATAATACTTAGCAAA ATTTACAAACACAAGAATGCAGAACAGAAAAGAAAACTGAGTGATGATAGTGAGGAGGAAATGATATATATAAAGCCAGAGGACGAAATTTTTCACAAGT TAAGCTCGTGGTCCTTCATTTTTCCATTGCAACCTCAGCAGCCTGCACCTCATGAGCTGAAGAATTACAAGCCAATGGGATTAGTTTTGGCTGTTGAGGC AGACAAAATTCCAACTTTCCGTCAAGAATTGGTTACTTTAATAAGTGAAACCTGAAAACAACCACAAGATTCCTGCATAATTTATCACGTGATAGAGTCT TTAATAGTAATACTTTTCTGAATCTTCCCAAGTTTTTAAACCCCATCTTTCAGGTGTTTGAAATACCAATTTTTGATAGTTATTTTTATTTATACTCTTA TGGTCCCTTTTGTTCTGCAATGACTATTGATACTTCAGTTGCTTTTAGGCTGTGGTTAGTTTCTACATTGCATTGATTATGAATGCCACCCTTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_133214; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_417133
| Blastp | Protein BCCIP homolog from Arabidopsis with 58.13% of identity |
|---|---|
| Blastx | Protein BCCIP homolog from Arabidopsis with 57.23% of identity |
| Eggnog | Involved in nuclear export, actin cytoskeleton organization and vesicular transport (By similarity)(ENOG4111GYV) |
| Kegg | Link to kegg annotations (AT2G44510) |
| CantataDB | Link to cantataDB annotations (CNT0000597) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462559.1) |
| Pfam | p21-C-terminal region-binding protein (PF13862.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |