Ll_transcript_426883

• Id Trinity: TRINITY_DN41538_c0_g1_i1
• Name Transcript: Ll_transcript_426883
• Sequence: CAATGATATAGGACCGCGCCTCCTTTTCCACCACCATTTCTCTCCGCCTTCTCTAAATCCCTAACCCGCCATATCCCTCTCTCTCTCTCCACCGCGTCTA CCACCGTGTCTACCACCACTCTTCACTCAAGTGTGTCTCAGACACGAGCCAAGTGCACGAGCTATATGATAAATTAACTGAAGGGTTTTTTCGGCTAAAT CCCCAGTTGCAAGTATACCTTATAGGAGAAGTAATATTGGAACTTGTAGTACAATGTATTGTGCCACCTTTAACTTTGGAGCGTGTTTGAATCTTGATGG AGCTTCTAAGCTGCATGGGTTTAGATACCACAAATCTTCTCCTGCCTTCCTCAACACCATGAATCTGAGTTATACCCATCATAGTTTTGGCCGGGTTACG CACTCACGTCCATTCCACAGTCTTTTCAAATGTGCTGCAGAGAATTCACAGACTTCAGCTTTTGTTGGCGTTGAGGCAAACAACAATTCTCAAAAGGTAG TTGTTCTGGTTATCGGTGGCGGGGGACGTGAACATGCACTTTGCTATGCCTTGCAACGATCACGGTCCTGTGAGGCTGTATTTTGTGCACCAGGCAATGC AGGAATTTCCAGCTCAGGATATGCTACTTGCATTTCAGACCTTGATATATATGATGGAGCTGCAGTAATCTCATTTTGCCGTAAATGGGGGGTGGGATTA GTTGTTGTAGGACCTGAAGCTCCACTTGTTGCTGGACTTGCGAATGATTTAATTAAGGCTGGAATCCCAACTTTTGGCCCATCTGCAGAGGCTGCTGCCT TGGAAGGTTCTAAGAATTTCATGAAGCATTTGTGTAACAAGTATAATATTCCAACTGCCAAGTACAAAGCATTTACAGACCCATATGCTGCAAAGCAATA TATTCAAGAACAAGGAGCACCAATTGTAATCAAAGCAGATGGGTTGGCTGCTGGAAAAGGAGTTACTGTTGCAATGACATTGGAAGAGGCATTAGAAGCT GTTGATTCAATGCTGGTGAAGGGCGATTTGGGTTCTGCAGGTTGTCGTATCATTGTTGAGGAATATCTAGAAGGAGAAGAAGTTTCATTTTTTGCATTGG TTGATGGAGAAAATGCAATTCCACTAGAATCTGCTCAGGACCATAAGCGAGTTGGTGATGGTGATACAGGGCCAAATACGGGTGGCATGGGTGCATACTC TCCAGCTCCTGTATTAACCCCAGAACTCCAGTCTATAGTAATGAACTCTATTATCATCCCAACAGTGAAAGGAATGTCAGCAGAAGGTTGCAAGTTTGTC GGGGTTTTATTTGCCGGACTTATGATTGAGAAGAAGTCTAACATGCCTAAGTTAATTGAGTATAATGTTCGATTTGGTGATCCAGAGTGCCAGGTATTGA TGGTTCGGCTGGAGTCTGATTTGGTTCAAGTTCTCCTTGCAGCTTGCAAAGGAGAGTTGAGTGGGGTATCACTTGACTGGTCTCCGGGCTCAGCCATGGT TGTGGTAATGGCAAGTAAGGGCTATCCCGGATCATATGAGAAGGGAACTTTGATTAAAAACCTTGATGAAGCCGAGCGCGTTGCACCTAGTATTCAGATA TTTCATGCTGGAACTGCTTTTGATTCAGAAGGAAGATTTATTGCAACTGGGGGGCGTGTTCTTGGGGTTACAGCCACGGGAAATGATCTCGAAGAGGCAC GTGATCGAGCTTATCGAGCTGTTGAGGATATTAATTGGCCAGGGGGTTTCTATCGTCGGGATATCGGTTGGAGAGCCCTTCCTCATACACAATCTACTAG AAAAGGATGAGGAACTGGTGTCCATGATCAATATTGGTATGATTATGACATTACACCCATGTAAACTGTCAAAACTGGTTGGTCCAGACAAGCTAGAATA ATAGGTTGCAGAACTTGCTGATTTACAAGTGGGCATGGAAATGGCAATGTTAGAAAGTGGAAAAAGACATTGATCATGCTGCTATACTTGAAAAGTGAAA GGCAAAAATTAACCTCCGATTTTGCTATACATTAAAATTATTGTAGTTTGCAATCAAAAGCTTGTCAATTAGCTATTTGTTATAGAGAGGATACATAGGA GCTTTTGTAACTTTTGTAGTTCAATGAGACTATGAAATTTCTGCCAAATAAGTTCATCAATTATTGCTCAG
• Tissue: pods
• Gene name: LI_gene_133435;
• Additional information: details;

Expression of Ll_transcript_426883

FPKM

• PAB: 1.7
• PNAB: 1
• PS1: 1.4
• PS2: 0.4
• PS3: 1.4
• PW1: 0.8
• PW2: 0.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_426883

• Blastp: Phosphoribosylamine--glycine ligase, chloroplastic from Arabidopsis with 74.95% of identity
• Blastx: Phosphoribosylamine--glycine ligase, chloroplastic from Arabidopsis with 74.95% of identity
• Eggnog: Phosphoribosylglycinamide synthetase(COG0151)
• Kegg: Link to kegg annotations (AT1G09830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453077.1)
• Pfam: Phosphoribosylglycinamide synthetase, N domain (PF02844.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;