Id Trinity | TRINITY_DN41685_c0_g1_i5 |
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Name Transcript | Ll_transcript_453168 |
Sequence | CTAATCATAGAAGGAAATGATAAGTTTTCTTCCTTTTCATTTCTAGGAAGTTGCGGGTGAAGAAGTCATAAAAGTCCCCTATTGTTCTCGTCATTCTCTG CCGTCATAAATAAAAATCCTCCACCACACGTCAGAAAGATGTGTAGACAAAGTATATATTATTATATATGTATTAGCCAAAGAAAGATGGTGTTACAGAG AAGCATGGTGCAAAGAGTGGTAGAGGGAATAACATTTTTATTCGAATTATTAGTGAAGTTTGTGTTGAGTGTACAGAAAGTTGATCCTCATCCTGAGAAT AAGGATGATGGTTATGGTTTGAGTTGGAGATTAGCGGTGGAGACAAACAATGTGCGTGGATGGAAGACGGTCCCACCTAAGTGTTACAAGCATGTTGAGG AATACATGACAGGTGGACAATATGAGGTTGATCTTAAACTCATCGTGGACCAAATATTAGGATATGCTTCTCAAATAAGTGTTTCAAGTGATGGCTTTGA TGCTTGGATTTTGGATGTGGATGACACTTGCATCTCTAACATTTCTTATTACAAAGCAATGCGATTTGGGTGTGACCCATTTGATTCATCAAAATTCAAG CCATGGATCATGAAGGGAATGTGCCCAGCAAATCCTGTGGTGTTGGGATTGTTCAATAAGTTGATAGAGAGAGGGTTCAAAGTCTTCTTGCTAACTGGTA GAGACCAAGCAACACACCTTAAAATCACTACTCACAACTTGCATAACCAAGGCTTTATCGGCTACCAACGCCTTATTTTGAGGGGTGCAGAATACAAAGG GCTAAGTGCAGTGAGATACAAGTCAAGGATAAGGAAGGAGTTAGAAGGAGAAGGATACAGGATATGGGGAAATGTTGGAGACCAATGGAGTGATCTCCAA GGAGATTGTTTGGGCCAACGTACCTTCAAGCTACCCAATCCTATGTATTGCATTTCTTAATTAATATATTCTACAATCATTGGTCAACCCAACATGTTGT AATTTCAAGTTGTAATCAACAAATCAAACATTTTGTAATATATCTTTGCATCACTTCAGTTTTTAGGTATTAGTAATATATGTTACAAATATATTTTTAT ATTTTCGGTTAATATTATATTGGTCTAGTA BLAST |
Tissue | pods |
Gene name | LI_gene_133610; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_453168
Blastp | Acid phosphatase 1 from Lycopersicon with 41.27% of identity |
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Blastx | Acid phosphatase 1 from Lycopersicon with 41.27% of identity |
Eggnog | Acid phosphatase(ENOG410YBHH) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430438.1) |
Pfam | HAD superfamily, subfamily IIIB (Acid phosphatase) (PF03767.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |