| Id Trinity | TRINITY_DN41685_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_453169 |
| Sequence | CTAATCATAGAAGGAAATGATAAGTTTTCTTCCTTTTCATTTCTAGGAAGTTGCGGGTGAAGAAGTCATAAAAGTCCCCTATTGTTCTCGTCATTCTCTG CCGTCATAAATAAAAATCCTCCACCACACGTCAGAAAGATGTGTAGACAAAGGTAAGCCTAGTGCCATCTATTTCTTTTTCCTCTCCTTTTCCAAATTTT GGTTGTCTTTTACTATTCTCATCATTCTAATCACTTATTTTCAGTATATATTATTATATATGTATTAGCCAAAGAAAGATGGTGTTACAGAGAAGCATGG TGCAAAGAGTGGTAGAGGGAATAACATTTTTATTCGAATTATTAGTGAAGTTTGTGTTGAGTGTACAGAAAGTTGATCCTCATCCTGAGAATAAGGATGA TGGTTATGGTTTGAGTTGGAGATTAGCGGTGGAGACAAACAATGTGCGTGGATGGAAGACGGTCCCACCTAAGTGTTACAAGCATGTTGAGGAATACATG ACAGGTGGACAATATGAGGTTGATCTTAAACTCATCGTGGACCAAATATTAGGATATGCTTCTCAAATAAGTGTTTCAAGTGATGGCTTTGATGCTTGGA TTTTGGATGTGGATGACACTTGCATCTCTAACATTTCTTATTACAAAGCAATGCGATTTGGGTGTGACCCATTTGATTCATCAAAATTCAAGCCATGGAT CATGAAGGGAATGTGCCCAGCAAATCCTGTGGTGTTGGGATTGTTCAATAAGTTGATAGAGAGAGGGTTCAAAGTCTTCTTGCTAACTGGTAGAGACCAA GCAACACACCTTAAAATCACTACTCACAACTTGCATAACCAAGGCTTTATCGGCTACCAACGCCTTATTTTGAGGTAATAATCTCTACCCATAATCATTA CTTAACTATAACATTTATGCAAGCCATGTAAGAGTTTTTCAACCTAACCTGATTAGGTAGAAAGATGAAAAACGTGAGTCCAGTTATGACATAGGAACAT CATTAGTGCTATGTACGAAAACGATTGGATACTTTAAATCCAGGTTGTCTCAAACATATGATTATGGGACAAGAATCTGCTGTCCCAAATTCTGTTCCAA AGTCTGTATTAAACCAATAATAACCTGTCATATCAGTTAAAAAAATTCAATATTCATATTTTTATTCACATGTTTTGGACAATTCATCCTCATCCATGAT TATGACATAGGACAAAACAAGTGGCGTAATTGGTGGTGTGAAGTGGATTAAATTGTACCTTTACTAAATTCCTAGAACCAATCAATTAAAATTCCAGTCT CGTCTTAGAAAATAAGGCTATTCCAATAACTCTCGTTATATATAAAAATATTTGAATTATTTACATCCCATTGTTGGGGAGAACAATTTATTTAAACGAA AGAGGTTACTTCTGTCGGTCCAATAATCCATGTGCTTGTTGTTACGTGCACTCATGTTTCACGATTTCCTCGCATGCCTTTTTTATTTTTGGTTTTTTCC TTCAAATTTTGTACTCCTTTTTAATAGATTTTTTGGCAAATTATCATGAACTTTTGATAGAAACATCCATAAATTTGTCAATAATAATATGCATGTTATG AAAATTGTTACTAATTACAGAAACTAAATCATTTTATCTTTGATCTCAAATTATTTAAGTAAATAATGATAGAGAGAGGAATGGAAATATATGATATTAG AAATGACAAAGTGTGTTGTCCATATATAAGCAATTGGCGGTTGGAGGAAGCTTCCTCCTCCAATAATGCACTCTTGTCTTGTCCTACAAATAAAAAATGA AATGAGTATCTCTCAAATCATGCTATGCATATATAGTTTTATTGGATGTGGATGACTTTAGAAAACCAATTCCTTAATCACCCTTTCATATATTTAAACC ATCCCAATTCCTTAATGACCCTTTCATATTTGATTTTAGAAAACCAAGGTTAGTGCATGCAAATTCAATAAATAGAGAATTGATGGGTGATAATGGTAAT TCCTTGGTTGATGTAGGGGTGCAGAATACAAAGGGCTAAGTGCAGTGAGATACAAGTCAAGGATAAGGAAGGAGTTAGAAGGAGAAGGATACAGGATATG GGGAAATGTTGGAGACCAATGGAGTGATCTCCAAGGAGATTGTTTGGGCCAACGTACCTTCAAGCTACCCAATCCTATGTATTGCATTTCTTAATTAATA TATTCTACAATCATTGGTCAACCCAACATGTTGTAATTTCAAGTTGTAATCAACAAATCAAACATTTTGTAATATATCTTTGCATCACTTCAGTTTTTAG GTATTAGTAATATATGTTACAAATATATTTTTATATTTTCGGTTAATATTATATTGGTCTAGTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_133610; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_453169
| Blastp | Acid phosphatase 1 from Lycopersicon with 37.44% of identity |
|---|---|
| Blastx | Acid phosphatase 1 from Lycopersicon with 37.1% of identity |
| Eggnog | Acid phosphatase(ENOG410YBHH) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430442.1) |
| Pfam | HAD superfamily, subfamily IIIB (Acid phosphatase) (PF03767.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |