Id Trinity | TRINITY_DN41751_c0_g1_i2 |
---|---|
Name Transcript | Ll_transcript_428905 |
Sequence | CAAAAATGAATTTCCTACAATCTTCCACCACCGTCCATGCATATTTCAAACCCATGTTTCTTGGTTATTTCCTAGGAAAATAGTATTTACTCTGTGACTG TGTCCTATCCTCACTTTTGGAGACATTGTATTGTATAATAATATACATAATCAAACAAACCAATACTGGTATTATATATCTTGTGTTCACTTGCTTTGAA CTTGCACATCATCACCATGGCTTTGGAACTTGTTGGAGGAGCAGTTTTGAATGCTGTGTTTGATGTTTTACTTGAAAAGATATCTTCTTCTGAGGTGGTC AACTTCTTTAAGAAGGAGAAAATCAGTAACAAGTTGCTCAAGGATTTGAAACTTTCATTATTGTCACTCACTGCTGTGCTCAATGATGCTGAAGAAAAGC AAGTAGCAAATGGTTATGTGAAGGAGTGGCTCAATGAACTTCAAGATCTTGCCTTTGATGTTGATGACATGCTAGATGCTATCTATACTCATGCCAGGGT TGCTGCAAATCAGGTACACACTATCAAAGCTGCTCCTTTGGAACACAACATCCAAGCCATTCTTGAAAGATTTGAATTTATCATAAAGCAGAAAGCTTTT CTTAATTTGGAAGTGGGTAAGAATCTGATGCTGCCAAAGAAGATACCATCATCTTCTTTGATAGAAGAATCTGATGTTTATGGTAGGGATGATGATAAAG AAGCTTTAATTAAACTGGTTTTATCGGATGATTCAAATCATAGCAATATAGCTGTGATTCCCATTGTAGGAATGGGTGGAATTGGAAAAACAACCTTAGC TCAACTCATATACAATGATTGTAGGGTGGAGACAGAATTTGATCTTAGAGCTTGGGTATATGCCTCTGAAGAATTTGATGTTTGCAAAATTACTGAAACT CTTCTAGAGGCTGTCACTTCAAGAAATCTCGATATCAAAGATCTAAATTCTCTCCAACTTAATCTAAAGATCTGTTTAGCAAAGAAAAAGTTTTTATTTG TTCTTGACGATGTGTGGAATGAAAACTACATTAACTGGGACAGTATGAGAATTCCATTCCAACTTGGCGCTCGAGGAAGTAAGATCATTGTAACAACACG TAGTATGCGTGTTGCATCAATTATGCAAACTGTTTCACCTTATACTCTTGGAGAGCTGTCTAACTATGAATGTTGGCATTTGTTTTCAAGACATGCATCT CTCCATGGTGATTTGATAGTTGACCCTAATCTAGAAAAAATTGGCAGAGAAATAGTTCATAAGTGCAAAGGGTTGCCCTTGGCTGTGAAGACATTGGCCG GACTTTTACGAGCCAAAGGTGATAAGCAAGAATGGCTTAAAGTATTAAACAGTGAGATATGGGATTTGCAAGATCATGAGAGCAATATACTTCCAGCTTT GAGACTAAGTTACCATTATCTCCCTGCAAATTTAAAAAGATGTTTTGCTTATTGTGCGATATTTCCAAAAAATTATGAGTTTGAGAAGGAGAAGTTGATT TTGATGTGGATGGCAGAAGACTTGGTGCAGCAATCAAAAAGAAATGATAGAATTGAAGATGTTGGGGATGAGTACTTTAGTGAATTGGTGTCCAGAACAT TTTTTCAGCCATCAACACGAGATAAGTCGTGTTATGTAATGCATGATCTTGTGAATGATTTAGCTAAGTTTGTATCTGGAACATTTTTGGTCAGGTTGGA AGGCAAGAGTTGTAGTATGGTGGATGAGCGAACTCGTTATTTGTCTCATATTATTGCACATCCTCCTGTTTATATAGATTCTGTTAGAAAAGCAACTCGC CTTCGCACACTTCTGCAGATGAGGTTGGTAGGTGGTACATCTCTTCACTTCTATGATGGCATACCACATGAATTGTTGATTGAGTTAAGATGTTTGAGAG TGCTATCTTTGGCAGGTGTATCTATTTATACACTGCCAATATCAATTGGGAATCTAAAACATTTGCGCTATCTGGACTTTTCTGATACTGAGATATACGA GCTACCCGAATCTGTGGCCGAGTTATACAATTTACAAACCCTGAAAGTTGCAGGATGTTGCAATCTTGAGAAACTGCCTAGCTTGATGTCTTGTCTTGTT GACTTGCGTTACTTGGATATCTCAGGCATTTTCTTAAGGAGAATGCCTTTGGAAATGAGTAAATTAAGCAACCTCCAGATGTTGAGTGATTATTTCGTAG GAGTTGAATATGGATGTTCCATTGGTCAATTGGGAGGACTATCTGGTTTACACGGATCGCTGTTCATCCATAACTTAAAACTTGTTGAAAATTGTAAAGA TTCTAATGAGGCCAAGTTGAAGGAGAAGATATTTCTTAGGAAGTTAACATTGGATTGGAGTGGAAATGGTAATACTGATAACTCACAGCATGAGAAAGAT GTATTGGATAGCCTACAGCCACATACAAATTTAAAGGAGCTTGTTATTTACAACTATCCCGGCACAGGATTTCCAAAATGGTTGGGAGGCTATTCCTCAT TCAACTTGGTATCTTTAGAGCTTAAAGGTTGTAAATACTGCTACCAACTACCTCCACTCGGACGACTTCCTTCCTTGAGAGAGCTTTCGATTATTAAATT TGACGGGTTGGAAAGCGTACTCTCCGAGTTTTATGGCAATGGAACTTACTCTTCTGATGTTGCAATTGTTTACTTTCCTGCACTAGAAATTTTGAGATTT GAGCACATGCCAATTTGGGAAGAATGGTTGGCAGGCGCTGATAATAATGGCTATACCGCATTTCCTCGTCTTAGAGAGCTTCATATTGAGAGCTGTCCTC GCCTTAAAGGGGACTTACCTGCTACCCTTCCATGCTTAACAATACTTTCAATCAGGGACTGCAAGAAGCTCCTTTGTTCACTTCCACTGTCTCCATTGCT GCACACACTGATCATTCAGAACTGTGGCGATCTAGACTTGCCAGCAACTTCCCTTGAGTGCTATCAGTCTCTATCTTCATTTCACTTGCACAATAGTTGC GACTCACTCGAGTTCTTGTCGTTAAATCTATTCCCTGCTCTCAAGTCTCTAGATGTTTCACGTTGTAAGAATTTGGAAGCGCTCGCAGTTTCAGTCTCAG AGGATACTCCTTTACCTACTTCCTTGCGCTCCTTGTGCATTAGTCATTGTCCAAAACTGTTACATTTTTCCATGGAAGGATTTGAACCCCTGAACCTTAC TTTGTTGATCATCAATAACTGCCAGAAGTTAACATCACTACCTGAAGATATGGATCACTGTATGCCAAACTTGAAGGCACTTCGACTGTCGAATTGTCCT GATATTAAGTGGACTCGGGATATGGATTGGCTTCATAAGTTAACATCCATCAGCATTCAGAATTGCAACAAATTCATGCAAGGAAAATTGGAGTGGAATG CATCAAATCTTACAGCTCTTAGTGACTTGACCAGGCTCAAGCTACCAAGTTTGTGCCCTGAAACAACCAAGCCTCAAAATTCTCGGCGGATTCCAGTTTC GATGGGAAATCGTAGAAGTGAGCCTCGAAGATATCAACATCGTCCACATACTCAAAACTGAAGAAAACACAGGGAACCAAGAATCTAGACAATGGTGAGA AATAGTCTTATAAGAGATACCCTCCTATATTTCATTGAAATTATGAAGTTAAGCAATACCAGATGATTTATTCATTTTTGTTTCCTTTTTCAGCCTCTTC TTATATAATAATAACTAGTCACATTCAGCTAATGGAATTGGTCATATTCTCAATGGAGGCATCTCAGTCATATTCTGGATATAATAATCTAATGTGTATG TTTATACAGTGTAAACATATCTTATATTTAAGAGGGTATTTGTAACTTGCAGTGTTGTGTGTGAGATCATTTACAAGGTTGGATTTTGCTGAATTTTATG ATGTACTTTGATTCTGAATCTCAAATTAATGTGATGTAGACAGTAAGAAACACCCTCATGCAATTGTTGATGAAGAAATATCATAAGATATCTTAATGTG CATATTTCCTAATTTAGATCCATAAAGTCAACTTAGGCCTCCCTCGTTACAATTTACGACCAATCACAAGC BLAST |
Tissue | pods |
Gene name | LI_gene_133697; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_428905
Blastp | Putative disease resistance RPP13-like protein 1 from Arabidopsis with 39.85% of identity |
---|---|
Blastx | Putative disease resistance RPP13-like protein 1 from Arabidopsis with 39.85% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT3G14470) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464996.1) |
Pfam | NB-ARC domain (PF00931.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |