| Id Trinity | TRINITY_DN41836_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_495935 |
| Sequence | CGCAATCCATATTTTTGTTCAAAATGTAATAACTATTATAGTAAAAAATGAGGCGTGTGATTCTGACAAGTCAACAGAACTAAGTAAACAGAAAGAAATT AGTCATAGCATTATCATTCTTACCGTGCGAGTTGACTCATCCAATAACATATTCAGACCCTCATCAAATGTAATCAAACTTCAACACAATGCTCACAACC CTCCCACCACGGCGTCGCTCTTCTTACGCCGCCTACTCCTGCGCCGTCTTCTCCGCCCTCCTCCTCCTCCTCTCCCTCTCTCTCCTCTACTCTCGCCTCT CTCCCTCCAACACTCACTCCCACTCCACCACCGCCACCAACGACAACGACAACAACAACGACGATCTCAACACCAATGACCCTATCGATGAATTTGACAT CATCGACGATCAACAACAGCAGCAAATTGACGATTATGCCCTTCACCAACTCTCCGCTCATTACTTCTTCGATCCTCTCACTTCCTCAATTCGCAGCTCC TTCAAAAAATCACGCCCTGGTGAGGACGGTTATAATTCTGCGCTGAAACTTATCCTGGGCTCGTCCGCAGAGGATTCTCGCTCTAAGACCGCTTTTGCCT CTGACGACATTCCCATCGATGATGACGTCAGAAGAAAAAGCGTTGAGGTTAGAGGAATCGAGGACGCGCTTTTGATGAAGGATTCTCCGTTGAGGGAATT GTGGGGAGATTGGTTTGATAAGAAGAGTGTTTTTCTTAGGAAAGATAGAATGTTTAGGTCTAATTTTGATGTTTTGAATCCCTTGCACAATCCAATGCTT CAGGATCCGGACGCAGTCGGCGTCGCCGGGTTCACTAGAGGCGATAGGATTGTGCAGAAATGGTGGTTACATGAGTTTAAGAAAGTGCCATTTCATAGTA AGATGAAGGTTAGTAGTAAAAAGGGTAATGTTGATTCAACAACTTTGCCTGTCGCGGAACGAAGGACTTTGAAGGATAGTTATGTGAGTAAAAAGAATTC TGTTAGTGGAGGTTTGAATTTGATGAGTGAAACAAGGAGTGCGATTCGGGATCATATATATGCAGATGGCAATACTTGGGGATATTATCCTGGTTTGCCA CTGCATTTGCGATTTAAAGAATTTATGGATGCGTTTTTCAGATTGAACAAGTGCAGTATGAGGGTATTTATGGTGTGGAATTCACCTCCTTGGATGTTTA GTGTTCGGCATCAGCGTGGCATTGAGAGTTTGCTCTCTCATCACCCTGGTGCATGTGTTGTAGTGTTCTCAGAGACCATTGAGCTTGATTTCTTCAAAGA TAACTTCGTCAAAGATGGGTAATTCTTAATTATCGTTCTCTTTAGCCTAACTTGTGTTGCTTTTCAAGTGCATTGTGGTATTTGTTTGAATTTTGCTTTT TAAAGCTATGGTGTTATTGGTTTAATTCTGCAGTTACAAAGTTGCTGTTGTTATGCCAAATCTTGATGAACTGCTTGAGGGTACACCTACTCACATTTTT ACTTCCGTCTGGTTTGAATGGAGAAAGACAAAGCTCTATTCTACTCATTACAGTGAGCTTGTTCGTCTTGCAGCTCTGTACATGTATGGTGGGATCTATC TAGACTCAGATATCATAGTTTTGAAGCCAATTTCTGCTCTTAATAATTCTGTTGGCATGGAGGATCATGTAGCTGGAAGTGCTTTGAATGGTGCTGTGAT GGCCTTTGAAAGGCATAGTCCGTTCATAATGGAGTGTTTGGAAGAGTTCTATGCAACGTATGATGATACTAAGTTGAGATGGAGTGGTGCTGATCTATTG ACAAGGGTTGCAAAGAAATTTTTAGGAGAAGAGATCAACTCTATGAAACAGTTGAAATTGAAAGTGGAACCCTCCTATATCTTCTTCCCTATAAGTTCTG GGAATATCACAAGATACTTTATTGCACCAGCAACAAAAACTGAGAAAGCTGAGCAAGAAGTTCTGCTTGAAAAAATAGTGCAGGAATCATTGACATTTCA TTTTTGGAATAGCTTGACATCTTCTCTCATACCAGAACCAGATAGCCTTGTGGCTAAGCTTATGAATCATGCTTGTATCAGATGCTTGGAATTACTATAA ATGTTAACATATACCAAATCTGTCACGAGCTTCCATAGAGAAACAAAGCAAGATTTTATTGATTTCTTTTGTTATTATAGCATATTATTCTTTAAGACTC TTGAACTCGCTTTATCTCTGCTTTCAGTCAGAAACAAAGCAAGACCATTCTTATTTTAATGGTTGAATAGGATCACACCAATTTATTTTTATTTGCATCA AAGTGTGTTTGAAGTTGAACCAACATGAAGAGACAATAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_133799; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495935
| Blastp | Uncharacterized protein At4g19900 from Arabidopsis with 65.12% of identity |
|---|---|
| Blastx | Uncharacterized protein At4g19900 from Arabidopsis with 61.79% of identity |
| Eggnog | lactosylceramide(ENOG4111PD8) |
| Kegg | Link to kegg annotations (AT4G19900) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423741.1) |
| Pfam | Glycosyltransferase sugar-binding region containing DXD motif (PF04488.14) |
| Rfam | - |
| GO | - |