Ll_transcript_495979

• Id Trinity: TRINITY_DN41868_c0_g1_i2
• Name Transcript: Ll_transcript_495979
• Sequence: CACAAATGTTGTAGATAAGATAGAACAAGTGTTATCTCTCTCTCTCTCACTACCTTCATGCTCTATAAACTTCAATGGCTTCCTTTCCTAATTTCTCTCA AATCCATTCCAAAAATGACACCAATCTTATTCTTCCAACTTCCACCAATTCAAAGATCAAAACTTTCACCTTTTCCCACAATTTTCAAACACTTCAATCC CAACCCCATTTCAGAAAATGTACACAAGCTTTGGTTTCAAATTCTGTTACCACTAACCCCATTACTAGCCAAAACCCAAATTCTGATATTTGTCAACTAT GCCTTGTTGGGAACCTAGAAAGTGCAATGAGTTACTTGAATTCAATGCAAACCCATCAAATTTTGGTTCATGAAGAAGCTTATGTTGCTTTATTAAGGTT ATGTGAGTGGAAGAGAGCAAGGAAAGAAGGGTCTCAAGTTTACTCTTTTATTTCAAATTCTATGACCCTTTTGAGCCTTCAGCTTGGGAATGTTCTTTTG AGCATGTTTGTGAGGTTTGGGAATTTGATTGATGCTTGGTATGTGTTTGGGAAAATGGAAGAGAGAAACTTGTTCTCTTGGAATGTTTTGGTTGGTGGGT ATGCTAAAGCTGGGTTTTTTGATGAGGCTTTGAATCTTTATCATAGAATGTTGTGGATTGGTGTTAGGCCTGATGTTTATACTTTTCCTTGTGTTTTGAG GACTTGTGGTGGCATGGCTGATTTTTTTAGGGGAAGAGAAGTTCATGTGCATGTTCTAAGATATGGGTATGAATCTGATATTGATGTGGTTAATGCATTG ATAACAATGTATGTGAAATGTGGGTATGTTGATACTGCTAGGTTGGTATTTGATAAAATGCCTTATAGAGATAGGATTTCTTGGAATGCCATGATTTCTG GGTATTTTGAAAATGGGAAGTGTTTAGAGGGACTGAGGTTGTTTTTTATGATGCTTGAATGTCCTGTTGATCCAGATTTGATGACCATGACGAGTGTGAT TACGGCGTGTGAGACTCTGGGTGATAAGAAATTGGGGAAGGAGATTCATGGTTATGTTCTCAGGACTGTGTTCTGGCGAGAACCTTCTGTTTATAATTCA TTGATTCAGATGTATTCATCCGTTGGACTTATTGACGAAGCTGAAAAGGTTTTCTCTAGAACTGAATACAGAGATGTGGTGTCATGGACTGCAATGATAT CCGGTTATGAGAATAGTTCACTGCCTCAGAAAGCGTTGGAGACGTATAAAATGATGGAAGTGGAAGGTGTCATCCCCGACGAAATCACCATAGCAAGTGT ACTAGGTGCTTGTTCTTGTTTAGGTCATTTAGATATGGGGACGGACCTTCATGAGATAGCCAAGCAAAAAGGGCTTATCTCTGATGTTATGGTTGCAAAC ACACTCATTGACATGTATACTAAGTGTAAACGCATTGACAAGGCTTTAGAAGTTTTCCGCTCTACTTGCAACAAGAATATCATATCTTGGGCATCTATCA TCTTTGGTCTTAGGATCAATAACCGGAGTTTTGAAGCTTTGCTGTCCTTCAGGGAGATGATGCTTAAACTAAAGCCAAACTCTGTTACTCTAGTTTCCGT CTTATCTGCATGTGGTAGAATAGGAGCTATGACATGTGGAAAAGAGATCCATGCCTATGCGTTGAGAACTGGAGTAAGTCTTGACGGTTTTATGCCGAAT GCAATTTTGGACATGTATGTAAGGTGTGGAAGAATGGAATATGCATGGAAACAATTTTTCTCGGGTGATCAAAATGTTGCCGCGTGGAACATTTTGCTAA CGGGATATGCTGAGCGTGGGAAAGGAGAGCTCGCTATTGAGCTTTTTCAGAAAATGCTAGAGTCAAATATTTATCCTGATCAGATCACATTTATCGCCAT ATTATGTGCTTGCAGCAGATCCGGTATGGTGGAAGAAGGCTTGGATTATTTTAACAACATGAAAAGTAAATACTCCATTACACCTAATCTGAAGCACTAT GCATGTGTGGTCGATTTACTGGGTCGTGCTGGGAAATTGGAGGATGCTTATGAATTCATACAGAAAATGCCGATGAAACCAGATCCAGCAGTTTGGGGAG CTTTATTAAATGCCTGCAGGATTCACCATCGTATTGAGCTCGGTGAACTTGCTGCAGAGAATATCTTTCGAGATGATACAACAAGTGTTGGATATTTCAT TCTTCTTTCTAATCTATATGCTGATATCCATAAATGGGACAAAGTTGCAGAAGTAAGAAAATCGATGAGGCAGAATGGGCTAATAGTTGATCCCGGATGC AGCTGGGTAGAAGTAAAAGGCACAGTGCATGCTTTTCTCAGTGATGATAACCTTCACCCTCAAATAAAGGAAATGGATGCAGTTTTGGAGCGATTTTACG AGAAGATGAAGGAAGATGCTATTGGAGGGCCGGAGAGTGATGATATGGACATAATGGAAGCTTCTAAGGCCGATATATTTTGTGGACACAGTGAGAGACA GGCCATTGCCTTTGGTCTTCTTAATACTGCCCCCGGGACGCCTATTTGGGTGACGAAGAATCTGTATATGTGCCAAAGTTGTCACAACACTGTCAAGTTC ATCTCGAAGGAAGTTCGCAGAGAGATTTTGGTAAGGGATACCGAACATTTTCACCATTTCAAGGGAGGCATCTGTTCTTGCATGGACGAAGGTTATTTGA GTCGGAATGTTTAGCAAGAAAACTGGTTCTATGGTCGGTCCGCGACCCCGCACCCTCTACTGTTTAAGCCTTATGATCACTGAGTTCCTTATTATTACAG TAAAGAAGGCCAAG
• Tissue: pods
• Gene name: LI_gene_133841;
• Additional information: details;

Expression of Ll_transcript_495979

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.8
• PS2: 0.3
• PS3: 0
• PW1: 1.2
• PW2: 0
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_495979

• Blastp: Pentatricopeptide repeat-containing protein At1g15510, chloroplastic from Arabidopsis with 66.83% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g15510, chloroplastic from Arabidopsis with 66.83% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G15510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456621.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;