Ll_transcript_396365

• Id Trinity: TRINITY_DN41946_c0_g1_i1
• Name Transcript: Ll_transcript_396365
• Sequence: TAAAAATACGTCCACCACTTTGCTCTCTCTTCTCAACCGGACCAGCACCACCACCAATGGAGCTCCTCCTCTTCTCAACGGCGTTCCTTCTAACATTCGC CGGCTTCACCCTCTCCGCCGAGCCCTGCCCGCCTTGCGGCAACACCACCGTCCCATTCCCACTAAGCACATCCTCATCATGCAACGACCCTTCCTACAAA ATCCGTTGCTCTTCTTCCACCCTCTTCTTCGACACACTCAACTACTCCTACCCAATCCAATCCATAAACCCTAACACCCAACGCTTCATAATTCAACCCG CTTCGTTAATCTCCAACACATGTGTCACCACCGATAAGATCCACCAAGGGATTCAACTAAACAACACTCTCCCTTTCAATATCACAAGTTCGAATACTAT AGTTTACTTGAACTGCACGCAATCGCTTCTCATGTCACCACTTAACTGTTCCTCCACTAGTCTCTGCCATTCTTATATAAACGGCACCGTTTCTGCGTCA GCATGTGGTGGAGAGTTATGTTGCTCGTATAGGGCTGGTGGGTCTAGTAACTCGTACATGATTAGGGTTAGGGAGTCTGGGTGTAGTGCTTATTCTAGCT TTGTGAATTTGGACCCGGTTTTGCAGGTGAACCGGTGGCCTGAACCGGGGTTAGAGATTCAGTGGTTGTTGCCGAAGGAAACGGTGTGTGGGTCCCAGGG GGACTGTGATACTACCAAGTCGAGTTGTGGTGCGGACACCAGATCTGGGAATGGGATCAACAGGTGTTTTTGTAATAGTGGGTTTGTGTGGGACCCAGTT CAAGGGGTTTGTGCTGAAGTCATGAATAAAGGCTCCACAGATAGGACAGCACTAATAGCAGGTTTAACAAGCGGAATTGGAGCATTACTCATCATTGTCA TCATTGCCACTTTGCTCTACAAACGCCACAGGCGCATCGTAGAAGCGCAACAACGCTTAGCCAAAGAGCGCGAAGGAATTCTCAATGCCAGTGGTGGAGG CAGAGCAGCTAAACTTTTCACTGGCAGAGAGATAAAGAAAGCAACAAATGACTTATCCAGTGACCGCCTTCTTGGCATTGGAGGCTATGGTGAAGTCTAC AAGGGAATTCTTCAAGATGGCACTGTTATTGCTGTCAAATGTGCAAAACTTGGAAATGCTAAAGGCACTGATCAAATCCTCAACGAAGTTCGCATATTAT GCCAAGTTAACCACAGAAACCTTGTTGGTCTACTTGGTTGTTGTGTGGAATTGGAGCAGCCTATTATGGTTTATGAGTTCATAGAGAATGGTACTCTTCT TGATCACTTGCAAGATCAAATGCCTAATGGCCGCGGCTTGCTTACTTGGACTCATCGCCTTCGAATCGCTCGCGATACAGCTGAAGGTCTAACTTACCTT CACTTCATGGCTGTGCCTCCTATATACCATAGGGATGTCAAATCCAGCAACATTCTGCTAGATATGAAACTGAATGCTAAGGTTTCGGATTTCGGGTTAT CGAGGTTGGCTCAAACTGATATGAGTCATATATCTACTTGTGCACAAGGCACCCTGGGGTACCTTGATCCTGAATACTATAGGAACTACCAATTGACTGA TAAGAGTGACGTATATAGTTTCGGCGTTGTGTTACTGGAGCTTTTGACAGCTCAGAAGGCAATAGATTTTAACAGGGCTGCAGATGATGTGAACTTAGCA GTTTATGTGCAGCGAATGGCCCAGGAAGAAAATTTGATAGAAGTCATTGATCCAACATTGAAGAATGGAGCTACAGCTATAGAGATAGACACAATGAAGG CATTGGCATTTCTGGCATTAGGGTGCTTAGAGGAACGAAGACAGAACCGACCTTCGATGAAAGAGGTAGCAGAGGAGATTGAGTATATCATTAGTATTGT CACTGCAAAGGAGATAGAGAAGTAGTCTTTTTATATCACAACTGTCGTAACCCGATTTTCGGTTGGAAATGGGTTCTGCGACTCCTACTAGCAGCCAGGC AGGATAAAGTTCTATACTTGTCTAATTGTGTTTTTAAGGTTTTGTCTGTACTTATTACGGTCTTGTTGTTAGGCTGTAAAATATGGAATTTCAGGCTCTT GTTTTGTAAATACATATTTATTACCTTTAGTGAATGAAAAGAAGTTCTGCCTAGGTCTGCTGGATAAATTTTTGTTGTTAACAGTTTTAAATCCTATACC TGCTAGTGCCATGTCCTTAGTCC
• Tissue: pods
• Gene name: LI_gene_133938;
• Additional information: details;

Expression of Ll_transcript_396365

FPKM

• PAB: 4.4
• PNAB: 1.5
• PS1: 10.9
• PS2: 2.4
• PS3: 5.1
• PW1: 0.9
• PW2: 1.2
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_396365

• Blastp: Wall-associated receptor kinase-like 20 from Arabidopsis with 52.84% of identity
• Blastx: Wall-associated receptor kinase-like 20 from Arabidopsis with 52.84% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT5G02070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418087.1)
• Pfam: Wall-associated receptor kinase galacturonan-binding (PF13947.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;