Ll_transcript_396225

• Id Trinity: TRINITY_DN41972_c0_g1_i3
• Name Transcript: Ll_transcript_396225
• Sequence: CACTCATTTCCAAACCCCGAGTCATAATCATATAGATCGAGAGAGAGAGAGAGAAAAATGTCAGGTTGGGACGAAGGAGGCATATATTACAGCGACCAAG CCAATTCATGGGAAGGAGAAGCCGATGCTTCAAACCACTCTCTCCTCTTGAAATTCAACGAGTTCATTCGTAACTTCGAGTCTCACAACAATGTCTTCCC TTACCGTGAATCCCTTCTCCACAACCCTAACTCCCTCCTCATCGACGTTGAGGATCTCAACTCCTTCGATCCTGAACTCCCCGCAAAACTCCGCTCCTCA CCCTCCGATTTCCTCCCGTTGTTCGAGACCGCCGCCGCTCAGGTTCTCTCCGGTCTCAAGACCAAGGTTGTTGGTGATTCAGGGCTCATGGAAGATGCTG CCACTGGTGATGTTCAAATCTTGCTCACTTCCAAGGAGGATGCTATCTCAATGAGATCGCTCGGGGCTCAATACATATCAAAGCTTGTTAAAATTTCTGG GATTACTATTGCTGCATCAAGGACTAAGGCTAAGGCAACCTATGTGACCCTGATTTGTAAGAATTGCAAGAATGGGAAGCAAGTTCCATGTCGCCCTGGA CTTGGGGGAGCCATTGTTCCTCGTTCCTGTGATCATGTTCCTCAGCCTGGAGAAGAACCATGCCCAATTGATCCATGGCTTGTGGTTCCTGACAAGAGCA AGTATGTTGATCAACAAACCTTGAAACTTCAAGAAAACCCAGAGGATGTTCCAACTGGAGAGCTTCCTAGAAATCTACTTCTCTCTGTTGATCGTCGTCT TGTTCAAAAAGTGGTACCTGGCTCAAGATTGACAGTCATTGGAATTTATAGTATTTACCAAGCTTCCAACTCTTCTACATCCCACAAGGGAGCAGTTGCT GTTAGACAGCCTTATATTAGGGTTGTAGGAATGGAAGAATCAAATGATGCCAAGTCTCAAGGCGAGGCTGCATTTACAACTGAAGAGATAGAAGAATTCA AAAAATTTGCTGCAGAACCTGATGCATATAAGGATATATGCTCTAAGATTGCTCCGTCTATATTTGGGCATGATGATATAAAAAAGGCTGTAGCATGTCT TCTGTTTAGTGGATCAAGAAAGAATTTGCCTGATGGAGTGAAGTTAAGAGGTGATATCAATGTCTTGCTTCTTGGGGATCCATCTACAGCAAAGTCCCAG TTTCTCAAGTTCGTAGAAAAGACGGCTCCTATTGCTGTTTATACTTCTGGAAAAGGCTCATCAGCTGCTGGGCTCACAGCTTCTGTAATTCAAGACAGCA GCACTCGTGAATTTTATCTTGAAGGGGGAGCCATGGTCTTGGCAGATGGGGGTGTTGTCTGCATTGATGAGTTCGACAAGATGAGACCAGAAGATAGGGT TGCCATTCATGAAGCCATGGAACAACAAACTATATCCATAGCCAAAGCTGGGATAACAACTGTTCTTAATTCAAGGACTTCTGTTCTTGCTGCTGCTAAC CCCCCATCAGGACGTTATGATGATCTTAAGACTGCACAGGATAATATTGATTTGCAGACAACTATTCTTTCTAGGTTTGACTTAATCTTCATTGTGAAGG ACAACAGAAACTACAATCAAGACAAGATCATGGCTAGTCATATCATAAAGGTTCATGCATCAGCTAATGCAACCATGGGTGAGAACAGGGTTCCAAAAGA AGAGAATTGGCTGAAGAGGTATTTACAATATTGTCGAACGGTATGCCATCCTCGTCTGTCAGAATCTGCAGCATCACTACTGCAGAATAATTATGTGAAA ATCAGACAGGATATGAGGCAGCAAGCAAATGAAACTGGAGAAGCTGCTGCAATACCAATTACTGTAAGGCAGCTGGAAGCTATTATTAGGTTGAGTGAGG CACTTGCGAAGATGAAATTATCTAATTCTGCTAATGAGGAGAATGTGCAAGAGGCAATGAAACTTTTCAATGTTTCTACAATGGATGCAGCCAAGTCTGG AATAAACCAACAAATAAATCTTACACCTGATATGGCAAATGAAATAAAGCAAGCAGAAACTCAGATAAAGAGAAGAATTGGGATAGGAAACCACATATCA GAAAGAAGGCTGATTGATGACCTCAGCAGAATGGGAATGAATGAATCTATTGTGAGAAGAGCTCTATTAATTATGCACCAGAGGGAGGAAGTAGAATACA AGCGAGAAAGGCGTGTTATATACAGGAAAGCATAATATCAGTGTTTTACTACCCATTATTAGGTGACATTCGGGTTGCTTAGGAGGCTCAAGGATGTGTC ACTAATTGTGTTCATGTATTCTCTTTATATTTTACTAGTAGGAGACCACTGCATTCTCTTTATTTAATCAATCCTATGTATTTATTATATTGCAACCACG TGTTCCCAAAGTTGGGGAAAACACCACCACATCCTTCGCCTACCGATTAACCATTGCTAATCTCCGATGTCATCATGAATTCATGATACATCATCCTCTT CAAACCTTGACGTACTTTTAACCATTCAGCTATTAAATATTACTCTCTAAAACTTGGTATCCAACATTACATTTAATCCAAAATAAC
• Tissue: pods
• Gene name: LI_gene_133981;
• Additional information: details;

Expression of Ll_transcript_396225

FPKM

• PAB: 0.3
• PNAB: 46.7
• PS1: 34.7
• PS2: 11
• PS3: 18
• PW1: 13.4
• PW2: 4.4
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_396225

• Blastp: DNA replication licensing factor MCM5 from Arabidopsis with 77.03% of identity
• Blastx: DNA replication licensing factor MCM5 from Arabidopsis with 77.04% of identity
• Eggnog: dna replication licensing factor(COG1241)
• Kegg: Link to kegg annotations (AT2G07690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464608.1)
• Pfam: MCM N-terminal domain (PF14551.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;