Ll_transcript_428518

• Id Trinity: TRINITY_DN42003_c0_g1_i2
• Name Transcript: Ll_transcript_428518
• Sequence: CTCCACTTGTGTAACACTGTTATAATTTCAGAATCATGTAGCTCAGTCACAATCCCTCTAAAAAATCAAACCCAATGTCTCTGGTAACAATCTTAATTTT TCCACTCTTCAACCCTTAACCTCAAACCCAAAAAAAGAAACCCAATAACCAGAAATCAAGAGACAAAAAAACATGCTTGGCCGCAGAGAAGGACCCTTGA TGAGGAACAACGCTCATTCTCTACGCAAATCAAGGATCATAACCGCCATAGTTATTGGGATTCTCATTGGATGCTTCTTTGCTTTTTTGTTCCCCAATGG CTTCTTCGTTCCTCACACTGTCACCCCTAATCGTCACATTTCTCTTGCTGGATCTAAGACCCAGGTTTTATTTTCATAAAAAGATTATAGCTTTTCATTT TTCAGCTTTTGGGTTTATCTCAATTCGATCTCTTCAATGATGGTTCCCGATGACTTTGAATTCATCACTTCTGAATAGGTCTTTCTCCTGTATTATTGTG TATTTGTGTTTGACCTTGCTGATCTAACTGAACAAGCTTGTTTCTTGTTTTAAGATTTGTTAAGTTAGTTAATAACCTTAGATGGATCATGTGAACACTT CACATCTCTATGATCAGTTTTACTTGTGAGAGAGTATTAGATAAAATTGTAGGAATGCTAGTTTTCAACGTGTAGTTCAATATGGACTTTTTGTGTGTAC CTAGATCAGTGGATTTGGGAGGGAAAGAATGTTAGATTTGGTTTTCATATGTTTGGGTTTGTTGGATGTGGTTGATACATGCTTGAAAATTCAACGGTTT CGTTGCATACTGCATAGGCTACTAGTGTTAGAAAATGCAAAGTGGTTATTTACTATTCCACTGCTACAACATTAAGAAGCACTTCTTATATGAAAGGTCG TGCAGTCGTGCACTATGTAGCACTTAGCATTTAGTTCGTAGTGGCAGTATGGCGCTATACATTGAGGTCTATAGTGTAGCAGCCGGGTATGATAGCCTAG AAGTCTCCATATCTCTAGTATAATAACGAGACTCTACCATTATGTAAAATGTACTAAGTAATATAAATCTGCATCTTCTTCCTCTTCCTCGAACAACTAG CTTGATTTGTATAATTGTATTAGCCATATTTTTCTTGCTCAATTGGTTTGTACATGTTTTTTCTGGGTTTATAGGAAAAAGTATCAATTTCATGAGGCAT GACAAACTTCATTTTTTTACGAATATTTTGTTTGGCAGGGAGGTTCAGATGAATGTGAATCATCAGATCGGGCCAACATGTTGAAATCAGAGTTTGTGGC AGTATCAGAGAAGAATGCTGAACTGAAAAAGCAGGTGAGGGAACTGACTGAAAGGCTTCGGCTTGCAGAACAAGGGAAAGACCAGGCTCAAAAGCAGTTT CTTGTATTGGGTAAGCAGCAAAAAGCTGGACCTTTTGGTACTGTCAAGGGATTAAGAACCACCCCTACTGTTGTCCCTGATGAATCTGTAAACCCAAGAT TGGCGAATATATTAGAGAAAGTTGCGGTTAAGCAGGAGCTTATAGTTGCACTAGCGAACTCCAAAGTTAAGGAGATGCTGGAGGTATGGTTCACCAATAT CAAGAGAGTTGGTATATCCAATTATCTGGTTGTTGCTTTAGACGAAGAGACTGCAAAGTACTGTGAAGCAAATCAAGTCCCATTTTATAAGAGAGACCCA GATGAAGGTATTGATGCCATTGGAAAGATTGGAGGGAATCATGCTGTCTCTGGGCTTAAATTTCGCATTCTAAGAGAATTTTTGCAGTTGGGATATAGTG TTCTTCTGTCAGACGTTGACATAGTATATTTGCAGAACCCTTTCGATCATCTATATCGGGATTCAGATGTGGAGTCCATGAGTGATGGTCATGATAACAT GACTGCTTATGGCTATAATGATGTGTTTGATGAACCTGCAATGGGGTGGGCTCGATTTGCTCATACTATGAGGATATGGGTTTACAACTCTGGTTTCTTC TACATCAGACCAACAATCCCATCAGTCGAACTTTTGGATCGTGTCGCAACTCGACTTTCGAATGAGAAGGCATGGGACCAGGCCGTTTTCAACGAGGAAC TCTTTTACCCCTCACATCCTGGTTATGATGGTCTTCATGCTGCAAGAAGAACTATGGACATCTATCAGTTCATGAATAGTAAGGTTCTGTTCAAGACAGT AAGGTATGATGCTAACCTCAGCAAATTGAAACCAGTAATTATTCATGTGAATTACCACCCTGATAAGCTTCCAAGAATGAAAGCAATTGTTGAATACTAC GTTAATGGGAAGCAGGATGCTCTTAAACCTTTCCCTGAAGGCTCAGATTGGTGATTGTTTCTGCAGAAATTTTCTTGGCATCTTCATTGTGTAGACCAGT TCCACAGTAAATTTCATTAGTTTTAAAAGAATGTATGTAGACCCAAAAGGAATCATTTTATGAGCACATTGAGTTATGCTTTTGCACGTTCTACAATGCT TCAGTTTTCTTTGTTTCTTCTTATCCCTTTTTATTATTTCATACTTGTTTGCTGATGGAAATTTTTTGTAGTTTTGATCTTAATACCATATACATTCGAA AATACATTAAAAATCTCAC
• Tissue: pods
• Gene name: LI_gene_134024;
• Additional information: details;

Expression of Ll_transcript_428518

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.6
• PS2: 0.3
• PS3: 0.4
• PW1: 0.5
• PW2: 0.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428518

• Blastp: Arabinosyltransferase RRA3 from Arabidopsis with 76.26% of identity
• Blastx: Arabinosyltransferase RRA3 from Arabidopsis with 75.27% of identity
• Eggnog: Nucleotide-diphospho-sugar transferase(ENOG410YBEW)
• Kegg: Link to kegg annotations (AT1G19360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448513.1)
• Pfam: Nucleotide-diphospho-sugar transferase (PF03407.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;