| Id Trinity | TRINITY_DN42054_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_428601 |
| Sequence | TTTAATTTCAATTTTGCTGAAACGGCACTGCGTTTTTGCGTAGAGCAACTCAAGGGAAGATAGGTTTAGGGTTTGGTGGAATTAGAGTATAATCCCAACC AATCCTTCAATTCAATTCAATTACATTCTCTCATTCCAATCCAATGCTTTATTCTCTTAGCAAAACCCTTTCTCCCAAACTAATTCTATCTCAAATTCAC CCATTCTCATGGATTTCTTTGGGATTCATTTCCACAGCTTCAAAATCAAAAGATCACTCTTTTACACTCTCATACCTCATTAACACTTGTGGCTTTTCAC CTCAACGTGCTGCTACCATTTCTAACAACATCAATTTCAAAACTCGTGAAAAACCAGATTCAGTTATTGAGTTCTTAATGAACCATGGTTTCTCACAATC CAGTGCATTAAGTGTTATTAGATCAGCCCCATCACTTCTTCAATCTTCTGATCCCAACAAATTCTTTTTGCCCAAAATTGAATTTTTGAAGTCTAAAGGT TTTTCTGATTCTGATATACTCACCCTTATAATCAAGTTCCCTACTATTCTCAAGAGAAGTTTGGAGAATGAAATTATACCCTCTTTCGATTTCTTTAGCG ATATGTTTCGGTCTGAACAGAAAATGATTAAGACTGTTATGCGCCATTCGGGTATTCTATATGGTCTTAATAGCTGCATTGCACCAAATATCAATCTCCT TAGGGAAGAAGGAGTTCCTGAATCTCATATTGTTCAATTTGTACAATACTATCCTCGATCATTGAAAGTGTCTCCTGAGAGGTTTCAGGAGACTGTGGAG GACGTGAAGAAATTGGGGTTTGATCCTTTGAAGAAGCGATTTGTTGTAGCTATTCATGTAAGGAGATGCATAAGTGGATCCACTTGGGAAAGGAAGGAAG GTATCTATAGAAGGTGGGGTTGGACTGATGATAATTTTCGCGCAGCGTTTAGACTTCATCCATTCTGTATGTCAATGGCAGACAGTAAGATTGAGGCAGT CATGGAATTTCTGGTGAACAAATTGGGTTTTGAGTCAGCTGTTATTGCCCAGCATCCAGTACTGCTAACCCTGAGCTTGGAGAAACGAATTATTCCGCGC GGTTCGGTTGTTCTGGCTTTGTTGTCAAAGGGTCTGGTGGAGAACCTAAACTTGAGTCCAATATTCAAGACCGTCGAAGCGGTATTTTTGGATAAGTTTG TCTATTGTCATGAGAAGAAGGAAGCCGATGAGCTATTGAAGTTGTATCAGGCTAAATTGGCTCTTGCAGCATAGTAAAAGATATATATCAGTTCAAGGTA ATTAATGACTGAGATGAATTAACAGGGAAAGTGCCTGCCCTTTGATCTACATGTTCGCTAATGCATCGAGTTTTAGTTTTTAATCACTCTTTTGTTCTTG TTTTGTCTATTGCAGCTCAAATTTGGCAAATCAGTTATCTTTGCTGTCATGCCACATTTCAAGCCAAAAAATTTTGGTTGTTTGTTAAAGAATACTTTTG AACAGTCTCAATTAGCCACCTTAAGGGAGATGACATTTTGTTAGGGAGAAATGTATTTTTTGAGAGGATGTATAATACTATAATCCCTCATAGTGTGATA CATTGTTTAAGTAACAAAGCTTAGTATTTTACCAATTACAGATATAATTTTAACTGAGTATTTTTTTCTTATCTAAATGAAAGCATTTTAAATCCCGCAA AAAGGGGGGAATTCTGGAATTCCTTCTGCCCAACACATCTACCTTCACCTCTTCTGGCCCTTCTCTTGATGCGTCTTCCGTAATTCACCTTCATGGTTAT GGTTCTGCTTCTCTACCACCGTAACTCAGAAGAGCAAAAGGAAAGAAAATCCAAGAACCGACCCCATGTGCATGTCGTCTCCACCCTGTATTAGATCTAT ACATCTTTGTCCAGCTTCTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_134089; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_428601
| Blastp | Transcription termination factor MTERF8, chloroplastic from Arabidopsis with 24.04% of identity |
|---|---|
| Blastx | Transcription termination factor MTERF8, chloroplastic from Arabidopsis with 24.04% of identity |
| Eggnog | mitochondrial transcription termination(ENOG410XT49) |
| Kegg | Link to kegg annotations (AT5G54180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418058.1) |
| Pfam | mTERF (PF02536.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |