| Id Trinity | TRINITY_DN42056_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_428475 |
| Sequence | GTTTTCTCCGATAACAGGATGGTAGCCTCACTTCAAAAGCACTGACAAAGACACATGCATGTTCACGCACTCAACGGTCAAGATTCTCTCATATCCAATC ATCAAAATCTACGCCACCGTTTGATTCGATACTCTGAAACCCCTCAAAACTATAACCATAATGGTTACCATGATTTAACCATGGTTAAATAAAATTGCAC CCATCAACCAATTGGGTTTGAGAATTAAACTTTGTTTATCTCTCTCTGAGTTTTTCAGACTTAACATGTGAGTGACAGAAGAAAAATGGGTTTGGGTCTA TCATTCTTTCTCTCTCATTGATTTTGTGATCTATAACGTAAATTACACTTTGTGCAAAACTTATTTTTCTCAGATCTATTAAAGCTAATATATTTTTACC GTTGTTTTCTGTGTTTTATTTATATCATCATCATCATCATTTGATTTGCAAAATCATAATTTTTCTCTTTGATTTTCTTTCATTTCTCTCCTTTTTTTTC TTTCTAGGTGTATTTTACTTAGAAAATTTAGTTTTTTGTTTGTTATTCCTATTGTAGCAGATCCATGCTGGGAATGTAAATTTTTAATTTTTATCAGTAC CCTTGTAGTTTTGAATAATATTGTTTTTTTTTGTTTTTTGGTAGATCTTCCATGATGTTCTAGATCTTATTATCTCACTCTTTTTTAGTTAAAGATCTTG TTTCACAGGGCATTTCAGGGTTTAGATCTTGGTTTTTTGTGATGCTGTAGTAGAACATCAAATTTAGAAAGTTCTGGTTTTTTTTTATTCATGTTTTATT TTATGCCTTTTTCTTTTGAAGGATGAAAATTTTCCTTGAAAGTTGGGGTCTTTGGATCACTAAGTGAGAAAGTTTAGGAAACAAAAGAAAAAAGGATGAA CTATTTTCCAGATGAGGTAATAGAGCACATTTTTGATTCAGTGGTGTCACACCATGACCGCAATGCATTATCTTTGGTATGCAAAAGCTGGTATAGAATA GAGAGATTCACAAGGAAGAGTGTGTTCATAGGGAACTGTTACTCCATTAGTCCTGAAAGGTTGATTCAAAGGTTTCCTGACCTTAAATCTCTGACATTGA AGGGAAAGCCTCATTTTGCTGACTTTAGTTTGGTTCCTCATGGTTGGGGTGGGTTTTTGTATCCATGGATTGAGGCATTGGCCAAGAGCAAGGTTGGATT GGAGGAGCTTAGGTTGAAGAGGATGGTGGTCTCAGATGAGAGCCTGGAGTTACTTTCTCGCTCGTTCCGGAATTTTAAGTCTCTTGTTCTTGTTAGCTGT GAAGGGTTCTCCACAGATGGCCTTGCTGCTGTAGCTGCAAATTGCAGGTTTCTTAGGGAGCTGGACCTGCAAGAGAATGAAGTTGAGGATCATAAAGGCC AGTGGCTAAGTTGCTTTCCTGAAAGCTGTACATCACTTGTCTCTCTAAATTTTGCTTGCCTTAAAGGAGAGATTAATCCGGGAGCTCTCGAGAGACTTGT AGCCAGATCACCTAACCTTAAGAGTTTAAGGTTAAACCGCTCTGTTCCTCCTGTTACACTTACAAAGATAATGATGACAGCACCTCAACTAGTTGATTTG GGTATTGCATCATTTGTCCATGATACCGATTTATTTATCTTCTTTGATATGAAGGACACCATTGTAAAGTACTGCAAGTCAATAACCAGTTTGTCAGGGT TTATGGAAGTTGCTCCTAACAGCCTTTCAGCTTTATATTCTGTTTGCCCAAACTTAACGTCGTTAAACCTGAGCTACGCAACAGGAATTCAGGGTAATGA GCTGATTCATCTAATTCGCCATTGTGGGAATCTTCAACGCCTATGGGTAAATATATGTTATTGAGTATAAGATCTTTTCCTCTTGTTAATTCTAGATGGA TATCACTAATTTATCAACTTGTGCAGATAATGGACTGCATTGGAGATATAGGGCTGGGTGTTGTAGGAAAAACATGCAAAGATTTACAAGAATTAAGGGT TTTTCCATCCGTGGCCTATGGAAATCTTGATGCGGTCACAGAAAAGGGATTGGTTGCAATATCAAAGGGTTGTCCTAAGCTTCATTCATTACTTTACTTC TGCCATCAGATGACAAATGCTGCCCTCATAACAGTGGCTAAGAACTGCCCGAATTTTATCCGCTTCAGGTTGTGCATCCTTGATGCAACAAAACCTGACC CAGATACACTGCAACCACTGGATGAAGGTTTTGGGGCAATTGTGCAGTCTTGCAGGCGTCTTAGACGGCTATCACTCTCTGGCCAGTTGACCGACCGAGT TTTCCTTTACATTGGAATGTATGCTGAGCAGCTTGAAATGTTGTCTATTGCCTTTGCTGGAGAGAGTGACAAGGGAATGCTCTATGTTTTGAACGGATGC AAGAAACTTCGCAAGCTTGAGATAAGAGATAGCCCTTTTGGTAACGCAGCACTTCTGATGGACATAGGGAAGTATGAAACAATGCGATCCCTTTGGATGT CATCCTGCGAAGTGACTGTTGGAGCCTGCAAAATACTAGCTAAGAAGATGCCGAGACTAAATGTGGAGATATTCAACGAAAACGAACAAGCCGATTGCAA TGTGGAAGACGGGCAGAGAGTAGAGAAGATGTATTTGTATCGGACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTGTAGGTGCAT GTTAGGACATTTAATTTCTTGTTATTGAGCAGTTTGTACTTTGTTTAGGCTGTGACTGATTAATGCACTTTTAGCCGGGTGTAGTATTTTATGTTACTTG AATTTAGTAGTTTTATGCATATATTAGTTTTGCCTTTGCCTAACTCAAATAAATGTGTGGAGGGTGATGGGAAATTGTAAATGATGGATACCCATCTAAA ATGATTTCCTTATCTTAGTACAAGTTGTTTTTGAAAATATAAACCAAGCATGAATCAAAATTTGGAATATGAAACAAACATGGGAATGTTTTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_134092; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_428475
| Blastp | Protein AUXIN SIGNALING F-BOX 3 from Arabidopsis with 72.96% of identity |
|---|---|
| Blastx | Protein AUXIN SIGNALING F-BOX 3 from Arabidopsis with 72.96% of identity |
| Eggnog | F-box and leucine-rich repeat protein(ENOG410XQ54) |
| Kegg | Link to kegg annotations (AT1G12820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461211.1) |
| Pfam | F-box-like (PF12937.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |