| Id Trinity | TRINITY_DN42062_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_428587 |
| Sequence | ATTGAGGAGGCCTTCATCTCATATCATTTTTTGGGATATATATATACACGAATCCATCCTGTGCCCTAAATTCATAAAAGGGATAAAAGCTAATCCAAAT ATCCTAACTCCATTTTCATCCATGGCGTCTTCATTTTCAATCGCAACACCAACAACTCTGACAAATGTTCCAGAACTCATAATCAGAAACAGAGCTTGTT TCAACCGTAACCCTAACGTTTCAATGCGAGGGTTTCATAACCAACCCCGTCTCAATCTGAATCTGAACACGAATGGTCGTTCACCAACACTGAGAAACAA GGGTTTCTCTTCTTTGGTAGTTAGGGCGAGTACGGAAGAAGCAGTAGTTCCACAATCGAAAGTGACTCACAAAGTATACTTCGATATCAGTATCGGAAAT CCAGTTGGTAAGCTTGCTGGAAGGATTGTGATTGGGTTGTTCGGTGACGATGTGCCGCAAACCGTAGAGAATTTCCGTGCTCTTGCCACCGGAGAAAAGG GTTTTGGTTACAAGGGTTCTGCGTTCCACCGTGTTATCAAGGATTTCATGATTCAAGGAGGCGATTTTGACAAGGGAAATGGTACTGGAGGCAAAAGTAT ATATGGTCGTACTTTCAAAGATGAGAACTTTAAATTGACTCATACTGGACCGGGAATTGTTAGCATGGCAAATGCAGGCCCCAATACAAATGGGAGTCAG TTTTTCATATGCACTGTGAAGACACCTTGGCTGGATCAGAGACATGTTGTATTTGGCCAAGTTTTGGAAGGCTTGGACATTGTTAGGTTGATTGAGTCAC AGGAGACAGATAGGGGTGACCGTCCAACTAAGAAGGTGGTTATCAGTGACTCCGGTGAGCTTCCAATTGCTTGACTGAATTCTGAATGCAGCATCCTGCA TGGTTCTTGCCGCTGAAAAGGGGAAAAAGGAAATAGAAATTCCTGTTTTTTCAAAATTCTTGTTAGACTATTCACAGACTAGTTCAGCACTGTTTTGTTT TTCATGCTGAACCTCCAAACTTTGAGTAGCCATCTGTATTCTAGTACTAGTAAAATTTGAGTTGGTGTCAGTTTGGAAATTTTCATATCCAATCTGAATG GCATGCTTAAGCGTAGTTTCTATGTTGAAAAGGGTGGTGTAGAATTGGAGGAGTCTTTTACTTAAGCGTAGTTTCTATGTTGAAAAGGGTGGTGTAGAAT TGGAGGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_134102; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_428587
| Blastp | Photosynthetic NDH subunit of lumenal location 5, chloroplastic from Arabidopsis with 80.98% of identity |
|---|---|
| Blastx | Photosynthetic NDH subunit of lumenal location 5, chloroplastic from Arabidopsis with 80.98% of identity |
| Eggnog | PPIases accelerate the folding of proteins (By similarity)(ENOG410Z0G4) |
| Kegg | Link to kegg annotations (AT5G13120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428470.1) |
| Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |