Ll_transcript_428588

• Id Trinity: TRINITY_DN42062_c0_g1_i2
• Name Transcript: Ll_transcript_428588
• Sequence: ATTGAGGAGGCCTTCATCTCATATCATTTTTTGGGATATATATATACACGAATCCATCCTGTGCCCTAAATTCATAAAAGGGATAAAAGCTAATCCAAAT ATCCTAACTCCATTTTCATCCATGGCGTCTTCATTTTCAATCGCAACACCAACAACTCTGACAAATGTTCCAGAACTCATAATCAGAAACAGAGCTTGTT TCAACCGTAACCCTAACGTTTCAATGCGAGGGTTTCATAACCAACCCCGTCTCAATCTGAATCTGAACACGAATGGTCGTTCACCAACACTGAGAAACAA GGGTTTCTCTTCTTTGGTAGTTAGGGCGAGTACGGAAGAAGCAGTAGTTCCACAATCGAAAGTGACTCACAAAGTATACTTCGATATCAGTATCGGAAAT CCAGTTGGTAAGCTTGCTGGAAGGATTGTGATTGGGTTGTTCGGTGACGATGTGCCGCAAACCGTAGAGAATTTCCGTGCTCTTGCCACCGGAGAAAAGG GTTTTGGTTACAAGGGTTCTGCGTTCCACCGTGTTATCAAGGATTTCATGATTCAAGGAGGCGATTTTGACAAGGGAAATGGTACTGGAGGCAAAAGTAT ATATGGTCGTACTTTCAAAGATGAGAACTTTAAATGTGAGTTTACACACTCTTGCTAACTTCAACATTACATGACTGTCTTTGTTCTTGCTATATATTTA ACCACTTCAACATTACATAATCGCTTAAAAGTGTTCAATATTTCTTTAATGAAGAAGTGATGTAAACTCCGTGTCTCGTGTTACTCGTGTTTGACATAGT GTTTTAAGCACTTAACAGATTATTGCTTTAAGTCTTCAATACACATCAACAGAAAATTTCAACATTGTCTTACTTGTCTTGATTTTTTAATGGGATTATT GGACATTTTCTGTGCTTAAATGTTGTCATTTTCAGTTTGAGGATATTTTCATTTTCTTGTATTCTTATATTAAATATTCAGCTGAAGTTTTATTGTTTTA AATATAATGCTGATATATAGAATATATGTAGTGACTCATACTGGACCGGGAATTGTTAGCATGGCAAATGCAGGCCCCAATACAAATGGGAGTCAGTTTT TCATATGCACTGTGAAGGTATATTTCTGCCCTTAAATACTGTTATTTGTTTATGCTGGCTCCGGGGAAAAAATGTGGTAACCACACTCATGTTTGTTGTA CATTTGTATCAACTTTTAAACTTTCTTGACAACTTTTCTGCGTGTATGTCATAGATGAGCCTGGTCTTTTGTGCATCCCTCTTTTGTGCATTTTTGTCTA GTTATGGCTTGTGATTTGGTAAGATAAGAATCTAGGTCATCGTTAACAATTTAAAATTAAATTGCAACTTGAGTAGCACATGCTGCCTACTGAAGACACT GATTAATGTTTACAATGAAAACTTATGAACAATGTATCTGATAAACTGGGGGGGGGGGTTGTTTAATGATATTTGGTTATGACTTCTGACATAATGAACT TATCTGAAAAATGTCAGACACCTTGGCTGGATCAGAGACATGTTGTATTTGGCCAAGTTTTGGAAGGCTTGGACATTGTTAGGTTGATTGAGTCACAGGA GACAGATAGGGGTGACCGTCCAACTAAGAAGGTGGTTATCAGTGACTCCGGTGAGCTTCCAATTGCTTGACTGAATTCTGAATGCAGCATCCTGCATGGT TCTTGCCGCTGAAAAGGGGAAAAAGGAAATAGAAATTCCTGTTTTTTCAAAATTCTTGTTAGACTATTCACAGACTAGTTCAGCACTGTTTTGTTTTTCA TGCTGAACCTCCAAACTTTGAGTAGCCATCTGTATTCTAGTACTAGTAAAATTTGAGTTGGTGTCAGTTTGGAAATTTTCATATCCAATCTGAATGGCAT GCTTAAGCGTAGTTTCTATGTTGAAAAGGGTGGTGTAGAATTGGAGGAGTCTTTTACTTAAGCGTAGTTTCTATGTTGAAAAGGGTGGTGTAGAATTGGA GGA
• Tissue: pods
• Gene name: LI_gene_134102;
• Additional information: details;

Expression of Ll_transcript_428588

FPKM

• PAB: 0.8
• PNAB: 0.8
• PS1: 0.4
• PS2: 0.5
• PS3: 0.8
• PW1: 0.9
• PW2: 1.2
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_428588

• Blastp: Photosynthetic NDH subunit of lumenal location 5, chloroplastic from Arabidopsis with 84.76% of identity
• Blastx: Photosynthetic NDH subunit of lumenal location 5, chloroplastic from Arabidopsis with 84.76% of identity
• Eggnog: PPIases accelerate the folding of proteins (By similarity)(ENOG410Z0G4)
• Kegg: Link to kegg annotations (AT5G13120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428470.1)
• Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;