| Id Trinity | TRINITY_DN42076_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_428613 |
| Sequence | GAACATTCGAGATATGTGTCCGATATGGATTGAATTGGGCCGAGGTGAAGTAAAGTATAATAAAATTGAAAATATAGAGTGAAGAATAAGAAGAATAGGA AAAAATGGGTAGCCTAGAAGAAGAAGAAGTAATGGGTGAAGTTGAAGCCATGGAAGCTGTTTATGGAATCGATTTTCATCTTCTTCGTTCATTCCCTCCT CTTTTTCATCTTTCCCTTTTCCCTAGAACCGCTGATGATTCTTCCCAACAGTTTGTTGAAGCTATTATAGAGATACGAGCAACCCCTCAGTACCCAAGGG AACCACCTTGTGTTGATATTGTGGATTGCAAGGGTATGGATGAGAAGAGAAGAAAGCATTTATTACATCATATACAAACTAAAGCCCAGGAGCTCTGTCC CGGTTTCATGCTTGTTGCTCTATGTGAGGAAGCAGTTGAGAAACTTTCAGCTATGAATCATCCTGATGGCGATTGTCCATTGTGCTTGCTCCCTTTGGTC CCAATAGATCAGCAGAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCACAGTGAATGTATCATTAGATGGTGGAATTATCTTC AAAAATCTAAAGAAAAAGACTCTGCCAAGTCAGATAACTATAAAAAAGTGGAAGAGGGTATTGGAAACTGCCCGGTCTGTCGCAAACCTTTTCATGCCAA GGATCTGGAGCATGTGCTCGACCTAGTTGGTTCACATTCTTCCCAAGTAAGTTTCGATAGTGATAAGGCAATTGATGAGGAAGAGCTCCTTCAATCCGAG CATGAGATCATTAGGAGACAGAAATTTGAAGCCATCTTAAATTTGCAGAAGGAGAACAGTGGTCTCATTGAACCCAAAAAAGATTTAGTAATATTGCCCG GTATGTACCTTCCACAACCAGTCGCAACTCCGAGCTCCACACCAACCAATGAATCTGATGAGCAACAAGAAAAAGATATACCTACAGTCATCTCCGAAAA ACATGCTGGTGAAACCTCGAACGCGCCTAGTTCTAGCAGGCACAAGAATTTCGGTGCAGGGAGGCAGAGACCAAGAAGTGATAACCACTCTAGTTCGACC GTACGAAATCCGAGAAAACCAGTCCAACAACAGTGGGTTAGAAGAGATAATAATCCTAGCAGTAAGCAATAGAAGGGGTGTAAGGTTGTTGTTGTTGGAA GAGTAAGCAAAAAAGCAAAGAGATATAGATGATGCTTAATTTTTGTGCAAATTCCTGAGTTTTCATTTTCTATTTTGGGTTGTCATAAAGTTTCTTTCTA AAGCTCCACCCTTGTAATTTGTGTTACATTTAGCAACTAAGTTGCAATGTTCAGTATTTTCTTGTGATGTTTATTCTATTCCTGGTTATCAATTCTGTCT TTACATTATTACCAAATTATATGATGCTCAGTTTGAAATTTTGAATATCAATGAAGTATAAAATATATATTGTTCCTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_134124; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_428613
| Blastp | E3 ubiquitin-protein ligase RNF25 from Bos with 24.36% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RNF25 from Bos with 23.1% of identity |
| Eggnog | RING finger protein 25(ENOG4111H5K) |
| Kegg | Link to kegg annotations (511571) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464814.1) |
| Pfam | RWD domain (PF05773.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |