Ll_transcript_503568

• Id Trinity: TRINITY_DN42116_c0_g1_i2
• Name Transcript: Ll_transcript_503568
• Sequence: CTTTTCAACAACTTCGATCATGGGAAATAATAAGAGTAGGAGACATTGACTTTTGATCTTCTCATACGTATGTATATAACTATAATGTTTTTCCATAAAG AACTCACCATATTTGTTTGAAGGAATTTGGATGTAAAGAAAAGAATAAGATTCAGAAATATCATAAATGGGTTTCCAACTTCTTCTTACAATCTTCACCA AATCACTCACCTTTCTTACATGGCCCCCACTGAGTTTGATTTGTCCAGTGTACGCTTCTATTCGTGCAATGAAGAGTGATTCTCGCTTCAGCAATCAGCA ATGTCTTGCTTTTTGGGTTTTGTTTTCATTCTCTATGATTATGGAACGGGAATTTGCAGTGCTATTTAGCAGGCTACCATGGTGGCCTAATGTGAAAAGC ATGGCAACTATCTTACTGTTGATACCTTACTTTGGCGGTTCTCTGCACATCTATAAGTACTTGATTAAGCACTACTGTACTTGGAACATATGTACAAAGA ACTTGAACATCGTTAAGCAAAAGAGCACAGATGTTGTATTCGATGAGGACAGCAAACGCGTTCGTGTCACTGAACAGACAATTATTCCAAGTCAAATACA AGAGAAGAAATTTGCAGTAAATCAGGGGAGATATGAAGTTGCTATCAATTATAAGAAGCCAACATTTATAAAGCAAGTTCAGAAAGAATGGAGTTGTGCT TTATGTCAGATTAGTACTACCAGCGAAAATTGCTTACTGGCACATCTTCAAGGTAAGAAACACAAGACTAAGGAAAGTGAAGTTAGAAATATGCTACATT TAATGGATAGCAAATACTCAGCATCCTCTAAAGGAATAGTTCTACTAAGGAATCTCAACCAAATTGCAAAAATTCTGAATCCAGTTTCTAGATCCATAAG ATTATGTGAATGGATAAAACCAAACTTTGGATGGATGAAATTGAACACCGATGGTTCTATAAACAATGAAATTGCTAGTTTTGGTGGTCTGCTTCGGGAT CACATGGGTGAACCGATATGTGCTTATGTCTCTAAAGCTCCCCAAGGAGATGTTTTCTTGGTTGAACTTTGGGCCATATGGAGGGGCCTTGTTCTTTCCT TGAGTCTTGGGATTACTGCATTATGGGTGGAGTCGGACTCCATGAGTGTTGTGAAGACAATCAATAAAGAACAACCTTCTTGCCCAAAAGCTTATGGTTG CTTGGAACAAATCTGGAAACTCTTGACGAAGTTTGATAAATATCACATTTCTCACTCATGGCGCGAAACTAATAGAGCGGCAGATCATCTTGCAAAGATG GTTCTTTGTGGAAATGATGTTATTTTGTGGCCAGTTGATTTTCCACATAGTCTTCGCATTATTATCGACGACGATTCAAAAGGAAAGAAATATATTAGAA GGTGATTTTTTAGTCTATGGTTGATTCTGGTTTCTATTGGATTACCGAGTGAACTACGAAAAGAAACAATAGGAAACTTAAAAACTGTATGTTATAGCTT ATGCAAAGCCACTCTAGAGGTCAATTGGCATAACACATTTGTAGACATGACACTCAGTTGAAGATCAATGTAAAGCTTATTGCTTTAGCAAAGCTTAACT TTTAAACCATTTTAAGTTGACCTTATTGAATGGACAGAGTTACTATTCTTTTGATAGATAAAAATGTATGGAACTAAAAGTTACCACATTTTTGTGGTAT CAACATAAGCAAACATGACCAATCAAGTGTTCAGGGC
• Tissue: pods
• Gene name: LI_gene_134176;
• Additional information: details;

Expression of Ll_transcript_503568

FPKM

• PAB: 1
• PNAB: 3
• PS1: 5.5
• PS2: 1.1
• PS3: 3.1
• PW1: 4.8
• PW2: 2.7
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_503568

• Blastp: HVA22-like protein a from Arabidopsis with 34.38% of identity
• Blastx: HVA22-like protein a from Arabidopsis with 34.38% of identity
• Eggnog: receptor accessory protein(COG5052)
• Kegg: Link to kegg annotations (AT1G74520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459325.1)
• Pfam: TB2/DP1, HVA22 family (PF03134.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;